Naumovozyma castellii: NCAS_0C04000
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Entry
NCAS_0C04000 CDS
T02233
Symbol
NCAS0C04000
Name
(RefSeq) cohesin subunit SMC1
KO
K06636
structural maintenance of chromosome 1
Organism
ncs
Naumovozyma castellii
Pathway
ncs04111
Cell cycle - yeast
ncs04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
NCAS_0C04000 (NCAS0C04000)
04113 Meiosis - yeast
NCAS_0C04000 (NCAS0C04000)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncs03036
]
NCAS_0C04000 (NCAS0C04000)
Chromosome and associated proteins [BR:
ncs03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
NCAS_0C04000 (NCAS0C04000)
Meiosis-specific proteins
Cohesin complex and associated proteins
NCAS_0C04000 (NCAS0C04000)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
AAA_15
AAA_27
ABC_tran
Motif
Other DBs
NCBI-GeneID:
96902971
NCBI-ProteinID:
XP_003675754
UniProt:
G0VD28
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All DBs
Position
3:807106..810777
Genome browser
AA seq
1223 aa
AA seq
DB search
MGRLTGLELSNFKSYRGVTKIGFGDSNFTSIIGPNGSGKSNMMDAISFVLGVRSSHLRSN
ILKDLIYRGVIRDFSEEDPEDGEEQHPTSAYVKAFYEMDGKVVELMRTININGDTTYKID
NKTVSYKQYAAFLEKENILIKAKNFLVFQGDVEQIASQSALDLSKLFEEISGSIQYKKEY
DSLKDELEKLGKSTTESIRNRRRIHGELKTYKEGISKDEEYKNNVEKKKKYEMYFTLWKL
FHLDAQRIQFKDKLKQAKTEMSKLKEKINNEEKHLTRSKSAFLKENSILTKKRSQLDYTV
KEKEKVISQCNSIKIPLRASSKRIMNIEKRIESFKRDIERQKDYVSTFENQLKVVTKAKE
LFEVEIKKSARNHDKFRLTDTDLKWYEQLNEKYLSTGGSLLEQKISLLNNDKQEKTDEME
LLNRHIDVSKNRVTEELNITGENLQNQVTDMTSTLNEKNATYAEQMKKLKDYQMQVESSN
NQEYDLNYKLRETLVKLDDLSANQRESLKEKKLRENVTMLKRFFPGVKGLVHDLCRPKKE
KYGLAVSVMLGKNFDSIIVENLSVARECISFLKKQRAGTASFIPLDTIDSEQPTLSAPPS
QEYILTINAIEYDLAYERAMQYVCGDSIICDTLDIARDLKWNRGVRSKLVSLDGSLIHKA
GLMTGGISKDSKNRWDKEEYQSLMTLKDKLLIQIEEVSTVGRDAAAKARELESSLSLLNA
ELSSLRTQLVQVKRSVEENANEINYHNKLLTEQYTPKLESLQEEIQAIENSISSITAEKV
SLQETIFKELTDKVGFSIQDYERYSGDLMREQSKELQQLQKQILNIKNKLQFESERLKTT
EGKYHASLESLESAKSNLQSLEEEENECQQKRKQIEQHISEDEAELNRLQRVYDARQLDF
NNLDDVLAEYNNELQSLKHNRNQIREDMEKIDLERVGVLKNCKITNMEIPILSDINLSNL
PIDKIDEDTIAISNEIDVDYNDLPAKYKESSATTIREELENHIRSIEDTLNVLQPNARAV
ERFDDAQERFEVVEKETEDLKAREKKALTQFLKIKKRRRELFENAFDFVNEHLDPIYREL
TRNPNSSALLSGGNASLTLEDEDEPFNAGIKYHAMPPLKRFKDMEYLSGGEKTVAALALL
FAINAYQPSPFFVLDEVDAALDITNVERIAAYIRRHGNPDLQFIVISLKNTMFEKSDALV
GVYRQQQENSSKIVTLDLRNYAE
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgactaacaggactagaactaagtaattttaagtcatatcgtggcgtcaccaaa
attggatttggtgattctaatttcactagtattattggacccaatgggtctggtaaatcg
aacatgatggatgctatttccttcgtgttgggtgtaagaagttcccatttacgttctaac
attctaaaggatttgatatataggggtgttattcgcgatttctcggaagaagatcctgaa
gatggtgaagaacagcatcccaccagtgcatatgtgaaggccttttatgagatggatggg
aaagtagtagaattaatgagaactattaatattaatggggataccacttataaaattgat
aataaaacagtgagttataaacagtacgccgcatttttggagaaggagaatatcctaatt
aaggcgaagaattttttggttttccaaggtgatgtggaacaaattgcctcccaatctgca
ctggacctttccaaattgttcgaagaaatttcaggttcaattcaatataagaaagaatat
gattctctgaaagatgaattggaaaaattgggtaaatctacaacggaatccattagaaat
agaagaagaattcatggtgaattgaaaacttataaagaaggaatatctaaagatgaagaa
tataaaaataatgttgaaaagaaaaagaaatatgagatgtatttcacactttggaaatta
tttcatttagatgctcaaaggatacaattcaaggataaattaaaacaagcaaagactgaa
atgtcaaaattaaaggaaaaaataaacaatgaagagaaacatttaacacgatcaaagtca
gcattcctgaaggaaaactcaatattgaccaagaaaaggtctcaattagactacaccgtc
aaggaaaaggaaaaggtgatttctcagtgtaactcgattaaaattcctttacgagcatca
tctaaacgtataatgaatattgaaaagaggattgaatctttcaagagagacattgaaaga
caaaaggattacgtttctacttttgaaaatcaattaaaagtggtcactaaagcaaaggaa
ttatttgaagtggaaataaagaaatctgctagaaatcatgataaatttcgtttaacggat
actgacctcaagtggtatgaacagctaaatgaaaaatatttgtctactgggggttcttta
ttagaacaaaaaatatcacttttaaataacgataagcaagagaagacggatgagatggag
ttgctaaacagacatattgatgtatcaaaaaacagagtcacagaagagcttaacattaca
ggtgagaatttacaaaatcaagtaacagatatgacatcgactttgaatgagaaaaatgct
acttatgcagaacaaatgaaaaaactcaaagattatcaaatgcaagttgaatcatcgaat
aaccaagaatatgacctaaactataaattaagagaaactttggttaaattggatgattta
agtgcaaatcaaagagaatcgctaaaggaaaagaaactaagggaaaatgtaacaatgttg
aagaggttcttccctggtgttaaaggtttagttcatgatctatgccgtccaaagaaagaa
aaatatggactggcagtgtccgtcatgttaggtaagaattttgattcaattattgtagag
aatttatcagtagcacgagaatgcatatcgtttttaaagaagcaacgtgctggtaccgca
tccttcattccattagatactattgactctgaacaacccacattatcagccccaccatca
caagaatacatccttaccattaatgctattgaatatgatcttgcatacgaaagggcaatg
caatatgtgtgtggtgactccattatttgtgatacgctggacatagcaagagatttgaaa
tggaataggggagttagatcaaaattagtatccttagatggttcattgattcataaggcg
ggtttgatgaccggtggtatctccaaggattccaaaaatagatgggataaggaagaatat
caaagtctgatgactttaaaggacaaattgttgatacaaattgaagaagtttctacagtg
ggtagagatgctgctgctaaggctagagagttagaaagctctttatctttattgaacgcc
gaactttcctcattaagaacacaattagttcaagtaaagagatccgtggaagagaatgcc
aatgaaataaattatcataacaaattacttactgaacaatatacgccaaaacttgaaagt
ttgcaagaagaaattcaagcgattgagaactcgatttcttctattactgccgaaaaagtt
tccttacaagaaaccatcttcaaggaattaactgacaaggttgggttttctatccaagat
tacgagcgttattctggagatctaatgagggagcaatctaaggagttacaacaattacag
aagcaaattctaaatattaaaaacaaattacagtttgaatcagagagattaaaaacaaca
gaaggcaaatatcatgcttcactagaaagtttagagagcgccaaatcaaaccttcagtcg
ctggaagaagaggaaaatgaatgtcaacaaaagaggaaacaaattgaacagcatatctca
gaagacgaagccgaactaaacagattgcagagagtgtatgatgctaggcagcttgatttt
aataacttagatgatgtcttagcagaatacaataatgaattacaatctttgaaacataat
agaaaccaaataagagaagatatggaaaagattgatttggaaagagttggtgtcttaaag
aattgtaaaattacaaatatggaaattccaatcttatctgatatcaacctaagtaactta
ccgattgataagatagatgaagataccatagccatctcaaatgaaattgatgttgattat
aatgatctgcccgcaaaatataaggaaagtagcgcaactacaattagagaagaattggaa
aatcatataagaagcattgaagataccttaaatgtcttgcaaccaaacgctagggctgta
gagaggtttgatgatgcacaagagagatttgaagtagtggaaaaagaaacagaagatttg
aaagccagagaaaagaaggctttgacacagtttttgaagatcaaaaagagaagaagagag
ttatttgaaaatgcgtttgatttcgtaaatgaacatctagatccgatttatagagaattg
acaaggaacccaaattcatcagcattattatctggtggtaacgcctccttaactttagaa
gatgaagatgagccttttaatgcaggaattaaatatcatgcaatgccaccattgaaaaga
tttaaggacatggagtatctatctggtggtgaaaaaacagttgctgccctagctttatta
tttgctatcaatgcctaccaaccaagtccattctttgttcttgacgaggtggatgccgcg
ttagatataacgaacgtggaaagaatcgcagcctacatacgaagacatgggaatcctgat
cttcaatttattgtcatttctttgaaaaataccatgtttgaaaagtctgatgctctagtt
ggtgtttacagacaacaacaggagaatagctctaagattgtcactttggacctgaggaac
tacgctgaatag
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