Naumovozyma castellii: NCAS_0D03300
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Entry
NCAS_0D03300 CDS
T02233
Symbol
NCAS0D03300
Name
(RefSeq) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ncs
Naumovozyma castellii
Pathway
ncs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCAS_0D03300 (NCAS0D03300)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncs03041
]
NCAS_0D03300 (NCAS0D03300)
03009 Ribosome biogenesis [BR:
ncs03009
]
NCAS_0D03300 (NCAS0D03300)
Enzymes [BR:
ncs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NCAS_0D03300 (NCAS0D03300)
Spliceosome [BR:
ncs03041
]
Complex A
U2 snRNP components
U2 related factors
NCAS_0D03300 (NCAS0D03300)
Complex B
NCAS_0D03300 (NCAS0D03300)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
NCAS_0D03300 (NCAS0D03300)
Ribosome biogenesis [BR:
ncs03009
]
Eukaryotic type
90S particles
Helicases
NCAS_0D03300 (NCAS0D03300)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
AAA_19
SRP54
Flavi_DEAD
ResIII
AAA_23
AAA_7
nSTAND3
ABC_tran
AAA_30
Motif
Other DBs
NCBI-GeneID:
11528281
NCBI-ProteinID:
XP_003676272
UniProt:
G0VEC0
LinkDB
All DBs
Position
4:complement(617077..619476)
Genome browser
AA seq
799 aa
AA seq
DB search
MSLILFFNSTISIMSKATKFNTTKHSVTNMGSKRRLSEHEHPDPVKTSVPEVAAEIAEEK
LKTHPIPPPSPLTHHDAGEFSGLVRHQTTAEQAEALENAQVNPFTGRDFTPKYFDILKIR
RDLPVHAQRAEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQIACTQPRR
VAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLTRYS
CIILDEAHERTLATDILMGLLKQVVQRRPDLKIIIMSATLDAEKFQRYFGNAPLLAVPGR
TFPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDACRKISLEGDQL
VRDEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVVSTNIAETSLTIDGIVY
VVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKELI
EQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLACLDDEGNL
TALGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSIPNVFIRPSKDKKRADDAKN
VFAHPDGDHITLLNVYHGFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIRSQLERLMVRY
NLELNTTDYESARYFDNIRKALASGFFMQVAKKRSGGKGYITVKDNQDVLIHPSTVLGHD
AEWVIYNEFVLTSKNYIRTVTSVRPEWLIELAPAYFDLDNFQKGDVKLSLERIQQKMERI
SEISGSKDKHKKKSKKEKK
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgatattattcttcaatagtacaattagtattatgtctaaggctacaaagttt
aacacaaccaaacactccgtcacaaatatgggttccaaaagaagactttcagaacacgag
catccagatccagtcaagacatcagttcctgaagttgccgctgaaattgctgaagaaaag
ttaaagacacatccaatcccaccaccatccccattaacccatcatgatgcaggtgaattc
agtggcttggtgcgccatcaaactactgccgagcaggctgaagctttggaaaatgcacaa
gtgaacccattcactggtagagactttacacctaaatatttcgatatcttgaagattaga
cgtgatctacctgtccatgctcaaagagcagaatttttaaaaatttatcaagagaatcaa
attatggtgtttgttggtgagaccggttctggtaagaccactcaaattcctcaatttgtt
ctttttgatgaaatgccacatttagaaaatacgcaaatcgcatgtactcaacctcgacgt
gttgcagccatgtctgtggcacagagagtcgctgaagaaatggatgttaaattgggtgaa
gaagttggttattctattagatttgagaataaaacttccaataagacaattttgaaatat
atgaccgatggtatgttattaagagaagcaatggaagatcatgatttaacccgttattcc
tgtatcatcttagatgaagcgcacgaacgtactttggccacagatatccttatggggctt
ttgaagcaagttgtccaaagaagaccagatttaaaaattattattatgtctgctacttta
gatgctgaaaagttccaacgttactttggtaatgctccattgttagccgtccctggtaga
acattcccagtggaactttactatactcctgaatttcaaagagattatcttgattctgcc
attcgtacggttttgcaaattcatgctacagaggaagctggtgatattttacttttcctc
actggtgaagatgaaattgaagatgcctgtaggaaaatatctttagaaggtgatcaatta
gttagggatgaaggatgtggtcccttatccgtatatccattatatggttcattaccacct
catcaacaacagcgtatttttgaacctgctcctgaatcacataatggtagaccaggaaga
aaggtggttgtttctaccaatattgcggaaacttctttgactattgatggtattgtgtat
gtggtggatccaggtttctcaaagcaaaaagtctataatccaagaattagagtggaatca
ttgttagtatctcctatttccaaggcatctgcacaacagagagccggtcgtgctggtcgt
actagaccagggaaatgtttcagactatatacggaagaggctttccaaaaggaattaatc
gaacaaagttatcctgaaattttacgttccaatttatcatcaacagtgttagaattgaaa
aaattaggtattgatgatttagttcattttgattttatggatccaccagcaccagagact
atgatgagagcattggaagaattgaactatttagcatgtcttgacgatgagggtaattta
accgccttaggtagattagcatctcaattcccactagatcctatgttagctgtgatgcta
attggttcttttgaattccaatgttcacaagaaatcttaaccattgtggccatgttgtct
attccaaatgttttcattcgtccctcaaaggacaagaaacgtgcagatgatgctaagaat
gtgtttgcccacccagacggtgatcatattactttgttaaatgtgtatcatggattcaaa
tcagatgaagcttatgaatacggtattcataagtggtgccgcgatcattatttgaattat
agatctttgtctgcagccgataatattcgtagccaattggagagattaatggttcgttat
aacctggagttgaataccacagattacgaaagtgccagatattttgataatattagaaag
gcattagcttccggtttcttcatgcaagttgctaagaagagatctggtggtaagggttac
attaccgttaaagataatcaagatgtgttgatccacccaagtacagtgttgggacacgat
gccgaatgggtcatatacaatgaatttgtgctaacgtctaagaattatataaggacggtt
acatctgtgagacccgaatggctaattgaactggcacctgcctattttgatttagataat
ttccaaaagggtgatgtgaaattatcactagaaagaattcaacaaaagatggaaagaatc
agtgaaataagtggtagtaaagacaagcacaagaagaagagtaaaaaggagaagaagtaa
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