Naumovozyma castellii: NCAS_0D04120
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Entry
NCAS_0D04120 CDS
T02233
Symbol
NCAS0D04120
Name
(RefSeq) uncharacterized protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ncs
Naumovozyma castellii
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncs03016
]
NCAS_0D04120 (NCAS0D04120)
Enzymes [BR:
ncs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
NCAS_0D04120 (NCAS0D04120)
Transfer RNA biogenesis [BR:
ncs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCAS_0D04120 (NCAS0D04120)
Prokaryotic type
NCAS_0D04120 (NCAS0D04120)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
96903599
NCBI-ProteinID:
XP_003676354
UniProt:
G0VEK2
LinkDB
All DBs
Position
4:complement(778405..779580)
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AA seq
391 aa
AA seq
DB search
MDLAFQLRLFLYGNRNSTKNERDEYTMKPLSLYKCRRYLSDYLSDTTRLRKRRVGILLGY
VGTGYYGMQYNTPMFPTIESTLFDTLVSVGCISKDNSVDFHKNGFMRACRTDKGVHAMVN
VISVKMSKYDEPHIKDMINKLLVPKGIRVWDIKMVNKRFNCRRAVSSRWYEYLLPTYVLK
EPRKDVLMNEGVTSIDLVYYNEDCYSVPDLRIGKLESVLNHYLGTKRFHNFTTGKETMDS
SCMRYVKNITISPPFRKDDNKTEWVSLKIQGQSFMLHQIRKMIWLATLIARSNLQIEYVD
KFLQDSRIYIPNAPATGLLLNYPEFAAYNEKLKRLGYETIETNKYRKELQEFKDKFIYKR
IFQQETETPYPFILFAKSQEEWLQTITHTKV
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggatctcgcatttcaactacggctatttctttatgggaatagaaactctaccaaaaat
gaaagagatgaatataccatgaaacctctatctttatacaaatgtagaaggtatttgagt
gattatcttagtgacactactcgtctaagaaaacgtcgagtaggtatactccttggatat
gtcggtacaggttattatgggatgcaatacaatactcccatgtttccaaccattgaatcc
acattattcgacactttggtatcagtgggatgcatctcgaaggataattcagttgatttt
cacaagaatgggtttatgagagcatgtagaacagataagggtgttcatgccatggtaaat
gtgatttctgtcaagatgagtaaatatgatgaacctcatataaaggatatgatcaataag
ttattagtccctaaggggataagagtgtgggatataaaaatggttaataagcgttttaat
tgtagaagagctgtgagttcacgttggtatgaatatttattaccaacttatgtcctcaag
gaaccaagaaaggatgttctgatgaatgaaggagtaacatcgatcgacttggtatattac
aatgaggattgttatagtgtacctgatcttaggattggtaagctggagtcggtactaaac
cactatttgggaacgaaaagatttcacaattttacaactgggaaagaaacaatggattca
tcttgtatgaggtatgtcaaaaacatcacaattagtccacccttcaggaaggatgataat
aagaccgaatgggtttcacttaagatacaggggcaatcgtttatgctacatcaaatacga
aaaatgatatggcttgccactttgatcgctcgatcaaacttgcaaattgaatatgtggac
aagttcttgcaagattccaggatatatataccgaatgcacctgccactggactcctatta
aattatcctgaatttgctgcctacaatgaaaagctgaaaagactggggtatgaaaccata
gagacgaacaaatacaggaaagaattacaggaatttaaggataagttcatatacaaaaga
atttttcaacaggagacagagacaccatatccttttattttgtttgccaaatcacaggag
gaatggttacaaactattacgcatacaaaagtataa
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