Naumovozyma castellii: NCAS_0F00730
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Entry
NCAS_0F00730 CDS
T02233
Symbol
NCAS0F00730
Name
(RefSeq) DNA-directed RNA polymerase I core subunit RPA190
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ncs
Naumovozyma castellii
Pathway
ncs03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCAS_0F00730 (NCAS0F00730)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncs03021
]
NCAS_0F00730 (NCAS0F00730)
Enzymes [BR:
ncs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCAS_0F00730 (NCAS0F00730)
Transcription machinery [BR:
ncs03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
NCAS_0F00730 (NCAS0F00730)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
96904206
NCBI-ProteinID:
XP_003676913
UniProt:
G0VGD7
LinkDB
All DBs
Position
6:complement(143500..148524)
Genome browser
AA seq
1674 aa
AA seq
DB search
MDISKPVGSEITSVDFGILTSDEIRQLSAKQITNPTVLDNLGHPITGGLYDLSLGAFLRN
LCSTCGLDEKFCPGHQGHIELPVPCYNPLFFNQLYIYLRTSCLFCHHFRLRSIEVHRFAS
KLRLLQFGLIDEAYQVDQITINDLEDFLESAEMEGDEALEDNSLPIESKSKSSGKSAKEI
STNLLKELLQKREEFVDMAIAKAMSEGRTTEHGIFTATVNDERKALLHEFHKKLLLRTKC
DNCGMFSPKFRKDGFTKIFETALTEKQLTNNRVKGFIRQDMIKKQKQSKALNGGEKSAIE
EEEEEFDLGRNPAARPKTGSTYILSTEVRNILRAVFNKEQNVLKYVFHSKPNMSNKAVSA
DMFFMDVVVVPATRFRLPSKLGDEVHENSQNQLLSKILTTSLLIRDLNDEMSKLQKDKVS
ADDRRIIFSRLMNAFVTIQNDVNAFIDSTKAQGTAGGKLPIPGVKQALEKKEGLFRKHMM
GKRVNYAARSVISPDPNIETNEIGVPPVFATKLTYPEPVTSYNIAELRQAVINGPDKWPG
ATQIQNEDGSLVSLIGMSTEQRKALANQLMTPSSNITTHTLNKKVYRHIKNRDIVIMNRQ
PTLHKASMMGHKVRVLPGEKTLRLHYANTGAYNADFDGDEMNMHFPQNENARAEASNLAN
TDSQYLTPTSGSPVRGLIQDHISAGVWLTSKDSFFTREQYQQYIYGCIRPEDGHATRSKL
ITMPPTIHKPVPLWTGKQIISTVLLNITPANMPGINLKSSNKIKNEYWGTGSQENEVLFK
NGELLCGILDKSQYGASKFGIVHSLHEVYGPSVAAKVLSVLGRLFTNYIMSTAFTCGMDD
LRLTEEGNKWRSDILKTSVDTGREAAAEVTNLDKDTPANDPELLKRLQEILRDNNKSGIL
DAVTSSKVNSITSKVVSKCVPDGTMKKFPYNSMQAMALSGAKGSNVNVSQIMCLLGQQAL
EGRRVPVMVSGKTLPSFKPYETDAMAGGYVKGRFYSGIKPQEYYFHCMAGREGLIDTAVK
TSRSGYLQRCLTKQLEGIHISYDNSVRDTDGTLIQFLYGGDAVDVTKESHMTEFDFCLDN
YDALLNKYNPSALIEHLDVESALKYSKKSLKNRKKHIKEPHYKQNIKYDPVLSKFNPAKY
LGSVSEKFQDKLEGYLDKNSKLFKSHDSVNEKKFRALMQLKYMRSLINPGEAVGIIASQS
VGEPSTQMTLNTFHFAGHGAANVTLGIPRMREIIMTASAAIKTPQMTLPIWNDVSDEQAD
TFCKSISKVVLSEVIDKVTVTETTGSSMHNVAARSYVINMKFFDEEEYRAEYDVSKQELQ
TVVATKFLYELETAITKEVKKQKRTAVSDVGIAVPKSQTAISVTDGSSKKMAEDGDEEEY
QKKTKQAVSYEDPDDDEIETMREAEKSDEEIVDSDKDSEVESEQEDDSDVEMDAKLEETI
AEANMNMTKTQRDRQSALITNHKFVTKYNFDDENGKWCEFRLELAADTEKLLMVNIIEDI
CRKSIIREVPHIDRCIHPEPENGKRVLVTEGVNFEAMWDQEAFIDVDGITSNDVASVLKT
YGVEAARNTIVNEINNVFSRYAISVSFRHLDLIADMMTRQGTYLAFNRQGMESSTSSLMK
MSYETTLQFLTKAVLDNEREELESPSARIVMGKLNNVGTGSFDILAKVPNSTMA
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atggatatctctaagccggtaggttctgagattacctccgttgattttgggatcttaact
tctgatgaaattagacaattatcagcaaagcaaattaccaacccaacagtccttgacaat
ctgggccatcctattacaggaggtttatacgatttatccctaggtgcgttcttaagaaat
ttatgttctacatgtgggttggatgaaaaattctgtccgggacatcaaggtcatattgaa
ctaccagtcccatgttacaatccactatttttcaatcaattatatatttatttgagaact
tcttgtttgttttgccatcatttcagattgagaagtattgaagttcatcgttttgctagt
aaattgagattgttgcaattcggtttgattgatgaggcataccaagtggatcaaattacc
attaacgatttggaagatttcttggagtccgctgaaatggaaggtgatgaagctctcgag
gacaattctcttcctatagaatccaaatctaaatcatcagggaaaagtgcaaaggaaatt
tcaaccaatttattgaaagaattattacaaaagcgtgaagaatttgtggatatggcaatt
gctaaggctatgtctgaaggtagaactactgaacacggtatatttacagctacggtcaat
gatgaaagaaaggctttgctacatgaattccataagaagctattactaagaactaagtgt
gacaattgtggaatgttctctcctaaatttagaaaggatggatttaccaagattttcgaa
actgctttaactgaaaaacaattaaccaacaacagagtgaaaggttttattcgtcaagat
atgattaagaaacaaaaacaatcaaaggcgttaaacggtggtgaaaaatctgctattgaa
gaagaagaagaagaatttgacttggggagaaatccagctgccagaccaaagacaggttct
acttatatcctatcaactgaagtgagaaacatcttaagagccgtatttaataaggaacaa
aatgtattgaaatatgtcttccattccaaaccaaatatgtcaaataaggctgtctctgct
gatatgttcttcatggacgtcgtcgtagttcctgctacccgattccgtttgccttctaaa
ttgggagacgaagtccatgaaaatagtcaaaatcaactgctatccaaaattcttacaaca
tctcttcttatcagagatttgaatgatgaaatgtctaaactgcaaaaagataaagtatcg
gcagatgatagaagaattattttcagcagattgatgaatgcatttgttaccattcaaaat
gatgtaaacgcttttatcgattccacgaaagctcaaggtactgctggtggtaaacttcca
attccaggtgtgaagcaagctttggaaaagaaggaaggtttgtttagaaagcatatgatg
ggtaagcgtgtgaattatgcagcacgttccgttatttccccagatccaaatattgagacc
aacgaaattggtgttccaccagtatttgctactaaactaacatatccagaaccagttaca
tcttacaacatcgctgaattacgtcaagcggtgattaatggtccagacaaatggccaggt
gctacccaaatccaaaacgaagatggttccttggtttccttgattggtatgtctactgaa
caacgtaaggctttagcaaatcagttaatgacaccatcttctaacatcacaactcatact
ttaaataaaaaggtttaccgtcacattaaaaatagagatattgtcattatgaatcgtcaa
ccaacattgcataaggcttccatgatgggtcataaagttagagtgctacctggcgagaag
actttacgtctgcattatgctaacaccggtgcttacaatgccgattttgatggtgacgaa
atgaacatgcatttcccacaaaatgaaaacgcaagagctgaagcttctaatttggctaat
actgattctcaatatttaacaccaacatcaggttccccagtgagaggtctaatccaagat
catatttctgcgggtgtttggctaacaagtaaggacagtttcttcacaagagaacaatac
caacaatacatttatggttgtattcgtccagaagatggacatgctactagatcaaaattg
attactatgccaccaacgattcataaacccgttccactgtggacaggtaaacaaattatc
agtacggtattattaaacatcacaccagcaaatatgccaggtattaacttgaagtcttct
aacaaaatcaagaatgaatattggggtaccggttctcaagagaatgaagtccttttcaag
aacggtgaattattatgtggtatcttggataaatcccaatatggtgcttctaagttcggt
attgtccattctttacatgaagtgtatggtccatctgtggctgctaaggttctttctgtc
ttaggtagattgtttactaattatatcatgtccactgcatttacttgtggtatggatgat
ttgcgtttgactgaagaaggtaacaagtggagatctgatatcttaaaaacatcagttgac
actggtcgtgaggctgccgccgaagttacgaatttagataaggacacaccagctaatgac
cctgagttgctaaaacgtctacaagaaattttacgtgataacaataaatcgggtattctg
gatgctgtgacttcgtctaaggttaattccattacttccaaggttgtttcgaaatgtgtg
cctgatggtaccatgaagaagttcccttacaactcgatgcaagctatggctctgtctggt
gccaagggttctaatgttaatgtttctcaaattatgtgtttgttaggtcaacaagcctta
gaaggtagaagagtacctgttatggttagtggtaaaacattaccttctttcaaaccatat
gaaacagacgcaatggctggtggttatgttaaaggtcgtttctattcaggtattaaacct
caagaatattatttccattgtatggctggtcgtgaaggtttaattgatactgccgtgaag
acgtcaagatctggttacttacaacgttgtttgaccaaacaattggaaggtattcatatt
tcttatgacaatagtgtaagagatactgacggaacgttgattcaattcctatatggtggt
gatgctgttgatgttactaaggaatctcatatgaccgagttcgatttctgtttggataat
tatgacgccttgttgaataagtacaacccatctgcattaatagaacatcttgatgttgag
agtgccttgaaatactctaagaagtctttaaagaacagaaagaaacatattaaagagcca
cattataaacaaaatatcaagtacgatcctgtgttatctaaattcaatcctgccaagtat
ttggggtctgtctccgaaaagtttcaagataaattagaaggttatttggataagaactcc
aaattattcaaatcgcatgatagtgtaaacgaaaagaagttcagagctttgatgcaattg
aaatatatgcgttccttaatcaatcctggtgaagctgtgggtattattgcatctcaatct
gttggtgaaccttctacgcaaatgacattaaacactttccattttgctggtcacggtgcc
gccaatgtgactttaggtattcctcgtatgagagaaattatcatgacagcatctgctgcc
attaagactccacaaatgaccttaccaatttggaatgatgtttcggatgaacaagcggac
accttctgcaaatctatttctaaggtagttctatctgaagtgatagataaggttactgtc
accgagactactggttcttccatgcataatgtggctgctcgttcttatgttatcaacatg
aagttctttgatgaagaggaatatcgtgcagaatatgacgtttccaagcaagaattacaa
actgttgtagcaactaaattcttatacgaacttgaaactgctataactaaggaagtcaag
aaacaaaagagaaccgctgtgtccgatgttggtattgctgttccaaagtcccagactgct
ataagcgtcactgatggaagtagtaagaaaatggctgaagatggtgatgaggaagaatat
caaaagaaaacgaaacaagccgtttcctatgaggaccctgatgatgatgaaatagaaacc
atgagggaagctgaaaaatccgatgaagaaattgtcgattccgataaggattcagaagtt
gaatctgaacaagaggatgactctgacgtcgaaatggatgctaagttggaagaaaccatt
gctgaagccaatatgaacatgactaaaactcaacgtgatcgtcaatctgcattgatcact
aaccataaatttgtgaccaagtacaatttcgacgatgaaaatggtaagtggtgtgaattt
agactggaattagctgctgacactgagaaattattgatggtcaatatcatagaagatatc
tgtaggaagtctattatcagagaagttccacacattgaccgttgtatccatccagaacca
gaaaatggaaaacgtgttttagttactgaaggtgtcaactttgaagctatgtgggatcaa
gaggcattcatcgatgtggatggtattacctctaatgatgttgcatctgtcttaaaaaca
tatggtgttgaagctgctagaaatactattgtgaatgaaataaataatgttttctcacgt
tatgctatttctgtgtcgttccgtcatttagacttgatcgctgatatgatgacaagacaa
ggtacatacctggcttttaacagacaaggtatggaatcttctacctcatcattaatgaag
atgtcatatgaaactactttacaatttttgacaaaggcagttctagataatgagcgtgaa
gagttagaaagtccatctgcaagaattgttatgggtaaactaaataatgttggtacaggt
tctttcgacattcttgcgaaagtccctaattcaactatggcatga
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integrated database retrieval system
