Naumovozyma castellii: NCAS_0F01920
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Entry
NCAS_0F01920 CDS
T02233
Symbol
NCAS0F01920
Name
(RefSeq) uncharacterized protein
KO
K12882
nuclear cap-binding protein subunit 1
Organism
ncs
Naumovozyma castellii
Pathway
ncs03013
Nucleocytoplasmic transport
ncs03015
mRNA surveillance pathway
ncs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCAS_0F01920 (NCAS0F01920)
09122 Translation
03013 Nucleocytoplasmic transport
NCAS_0F01920 (NCAS0F01920)
03015 mRNA surveillance pathway
NCAS_0F01920 (NCAS0F01920)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncs03019
]
NCAS_0F01920 (NCAS0F01920)
03041 Spliceosome [BR:
ncs03041
]
NCAS_0F01920 (NCAS0F01920)
Messenger RNA biogenesis [BR:
ncs03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
NCAS_0F01920 (NCAS0F01920)
Spliceosome [BR:
ncs03041
]
Common components
Common spliceosomal components
Cap binding complex
NCAS_0F01920 (NCAS0F01920)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Cnd1
Motif
Other DBs
NCBI-GeneID:
96904324
NCBI-ProteinID:
XP_003677031
UniProt:
G0VGQ5
LinkDB
All DBs
Position
6:385158..387752
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AA seq
864 aa
AA seq
DB search
MFNRKRKGDFDDDDEGYRDYRPRMPKRQRIPPVVQLCKEMMPDICTIGESVKAFDDDIKF
LSEAIINEYGNDDYFNNALFQTLRAVVIEQPQKIPAIALLVIVVNADNAVAGKSIINYFF
EELQKCVKETVDESFVATSNETGPWNKIKLILRFLSTLSPIILKDDLIAIYTKLLKLSVD
LNNQDLGKRNPLSEAIFTNTLLNIPYLFYFNKTDEPMKESVEELISYLEANYNSKIADIS
LLREYNSNSPYEITELIQVALPNIKRALANNMEQLNDLFIDYSHLLPTQEIEKSGFNDAL
ELPTLEQLIPFSNLDKECGSVDSMWRVPRYIFHVYLPNSTGNFETVVPISSFAGQLFNDI
IIDLVESLEFNRQEVSKQVMSLDLFFKSGIFVEPGESIADLIADHEEDPLSSTFKIEDLA
IEAILSLIFKLPKVSQPFAYFYTLLVDICLSSPKAIAPVFGRAFRFFYNNLDDLDFELRL
RYLDWFSIQMSNFNFSWKWKEWEDDSIKLNKIFYNPKITFIRNLIRKELRLTSNIAEVED
SLPDEFIQYLDTSYVPTEEMLSFYQSLFTEHTVTVEEVSTNDLFFKLSSIPMDESVRTLL
DYVHKQNEQRDVNDLKTIISDIKEQYGSTVTDFNRFIIVLLIQCVVHSGSRSLSHANKYI
SDLKDELNEVFGALEISQEEKEYTIIDAVMKYWNKNSQNGFLIADALKFAGLISAKSLYN
FCFTEINGKNYGIVDGTAIEAIFRNLSQQGISNPENVEDFEFVFEKLCIIVNGVVQELGV
QTTEEIPAQILDPEMEMDLETEGPRLNSLWKYSTTVSFIKSILRRYSKEYRLLSEKFKGG
MDNAIVHEPTKKQILEWIKEVDII
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacagaaaaagaaagggtgactttgacgacgatgacgagggttaccgtgattac
cgccctcgtatgcctaagagacagagaattccgcctgtggtccaactttgtaaggaaatg
atgccagatatctgcaccataggagaatctgtaaaggcttttgatgatgacattaaattc
ttaagtgaagctatcattaatgaatacggcaatgacgattattttaataacgcccttttc
caaactttacgtgcagttgtaatagaacaacctcaaaagattcctgccattgctctattg
gtcattgttgttaatgccgacaatgcagtcgctgggaagagtattatcaattattttttt
gaagaacttcaaaaatgtgttaaggaaaccgttgacgagagttttgtagcaacatctaac
gaaactggtccatggaataaaataaaattgattttgagattcctatcaactctatctcct
atcattttaaaagatgatctaattgcaatctacactaaattgttaaaattaagtgtagat
ttgaacaatcaagatttggggaagagaaatccactttcagaagcaatctttaccaacaca
ttgttaaacattccctatcttttttactttaacaagactgatgaaccaatgaaagaaagt
gttgaagaattaatttcttatttggaagcaaactacaacagtaagattgccgatattagc
ttgttgagagaatataactccaacagtccttatgaaataacagaacttattcaagttgct
ttaccgaatataaaaagagctttagcaaataatatggaacaattgaatgacttgtttatc
gattactcccatctattaccaactcaagaaatagaaaaatctggttttaatgacgcacta
gaattacctactttggaacaattaataccattcagtaaccttgataaggaatgtggatct
gttgatagcatgtggagggttccaagatatattttccatgtctatctaccaaactccaca
ggaaacttcgaaaccgtagttccgatcagctcttttgctggccaattattcaatgatatt
attattgatcttgtggaaagcttggaattcaatagacaggaagtctcaaagcaagttatg
agtcttgacttgtttttcaagtctggtatatttgttgaacccggtgaatccatcgctgat
ttgattgcagaccacgaagaagatcctctatcgtcaacctttaaaatcgaagatcttgcc
attgaggcaattctaagtttaatatttaaacttccaaaggtttcacaaccatttgcctat
ttctatactttgttggtggatatatgtttaagttcaccaaaggctatcgcgcctgttttt
ggtagagccttcagattcttttacaacaacttagatgatttggattttgaattaagattg
agatatttagattggttctccattcaaatgagtaatttcaacttctcttggaaatggaaa
gaatgggaagatgattctatcaaactgaacaaaatattttacaaccctaagataactttt
attagaaacttaatccgtaaagaattaaggctaacatctaatattgctgaagttgaagac
agtttaccagatgaatttattcaatacttggatacctcatacgttcctacggaggagatg
ctttcgttttatcaatctttatttacagaacatactgttacggttgaagaagtatctact
aatgatcttttctttaaactaagtagtattccaatggatgaatctgtccgcacgttacta
gactatgtccacaagcaaaatgaacaaagagatgtgaatgacttgaagacaattatatca
gatattaaggaacaatatggatcaaccgtgactgatttcaaccgtttcataatagtttta
ttaattcaatgtgtcgtccattctggtagtagatccttatctcatgccaacaagtacatt
agtgatttgaaagacgaattaaatgaagtattcggtgccttagaaatctctcaagaagaa
aaggaatatactattattgatgctgtgatgaaatattggaacaaaaactctcaaaatggg
tttttaattgctgatgccttgaaatttgcgggtttgatcagtgctaagagtttatacaat
ttctgctttacggaaattaatgggaagaattatggtattgtggatggtactgcaatcgaa
gccatttttaggaatctatcacagcaggggattagtaacccagaaaatgtcgaagacttc
gaatttgtctttgaaaaactttgtattattgtaaatggtgttgttcaagaactaggtgtg
caaacaactgaagagattccggcacaaattcttgacccagaaatggaaatggatttggaa
actgaaggtccaagattaaattctctttggaaatactctacaactgttagttttattaag
agtatcctaagaagatactctaaggagtatcgtttactgagtgaaaaattcaagggtggc
atggataatgcaattgtccatgaaccgacgaaaaagcaaatccttgaatggatcaaagaa
gttgatataatttaa
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