Naumovozyma castellii: NCAS_0F03050
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Entry
NCAS_0F03050 CDS
T02233
Symbol
NCAS0F03050
Name
(RefSeq) chromatin-remodeling protein SWR1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
ncs
Naumovozyma castellii
Pathway
ncs03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
NCAS_0F03050 (NCAS0F03050)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncs03036
]
NCAS_0F03050 (NCAS0F03050)
Chromosome and associated proteins [BR:
ncs03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
NCAS_0F03050 (NCAS0F03050)
SWR1 complex
NCAS_0F03050 (NCAS0F03050)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
96904436
NCBI-ProteinID:
XP_003677143
UniProt:
G0VH17
LinkDB
All DBs
Position
6:607255..611625
Genome browser
AA seq
1456 aa
AA seq
DB search
MTRQTSGNPNKKVSQLERDEKVAELKFQYDLLTNELYHLKEFVSLFEFDPTYANESEAYS
KFIKENKLTLDAPTENNNIKLNEKIRRRQLRTTTINNVTTDADATEMSFESKLEMIQPLV
QRRYNELTESSQVSKNKEPRMMPKVKKESVLNAKVKIKAPKAKRSYIKMKTEELPQEKEN
GPEIYSTDANNLQYDGEEEDDFYFTTSDEDDFKAKPGRRKKQPRLNLTLHPPRQTITNPL
QVHNSKYKSLSDYLNSFKSLEEDMTIPEYEHYLAEQREIVLKIKRGLRSGALVFDKETDS
LQPMTTKEARLIQVNKPDPISYHYKEQNLSVHREYLINHGIYMSKLFASGKRARIARAKK
VSLMVEQHFKHLAGADERKLKEEERHRKLLARTAMQAVKKRWNMAEKAFRVLKRDEEDQL
KRIQGKEHLSKMLEKSTQLLGAQLNQNKDGSVTNGEGLTSDENMDSDDDMLSSSSENESE
TSNTADQLSTSEINDESLSIEELKKKYNSLEANTIDQNKNDELTSATVNEKDFVLDESDT
SSLDPVTTDESTSEDVSDDEVESTENPADLTSLFATNEITSDMEDSDDFVMSEPESITPA
SETPDKGELLPNEAGAENSEQVVPNEQQLSVVDVPVPSLLRGTLRTYQKQGLNWLASLFN
NNTNGILADEMGLGKTIQTISLLAYLACEKQNWGPHLIVVPTSVLLNWEMEFKRFCPGLK
VLTYYGSPQQRKEKRKGWNKPDAFHVCIVSYQLVVQDQHSFKRKKWQYMVLDEAHNIKNF
RSTRWQALLNFNTRRRLLVTGTPLQNNLAELWSLLYFLMPQTVIDGKKVSGFADLDAFQQ
WFGRPVDKLIETGAGYQQDAETKKTVSKLHQVLRPYLLRRLKADVEKQMPAKYEHIVYCR
LSKRQRFLYDDFMSRSQTKATLASGNFMSIVNCLMQLRKVCNHPDLFEMRPILTSLEIGS
SVPSYYTDTNRFVHKMLSKNGSLAAIDLKNLNLIFNGNDELLTTNTAETISKLKCLDEFT
NAISCLQKQTKSEELHSNFNFQDASAFYKYFNREKIEQAIESLEFFKYINTLRADTKPIY
GSNLIKLLNIYDTKDETKSQLLDNFITPLQTRFLLGKDIIEKYAVITPGAVTLDMRYLTL
GLNDDSLLDQAAKSTLIQELHEVDNPFHQLQTKLTIAFPDKSLLQYDCGKLQKLAKLLQD
LKDNGHRALIFTQMTKVLDVLERFLNYHGYIYMRLDGATKVEDRQILTERFNNDPRVTVF
ILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSEHTIES
NILKKANQKRQLDNVVIQKGDFTTDYFTKLSVRDLLGSEDNDGAKETEGPLLLDDPNITK
DPRHLEKLLAQAEDEDDVKAANQALREVEVDDEDFTEDPTKLNSHEDKIEELEDEYEGTG
HVEEYMIRYIANGNYY
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atgacaagacaaaccagtggaaacccgaataagaaagtcagccaattggaaagggacgaa
aaagtggcagagttgaagtttcaatatgatctgttgacgaatgaactgtatcatttgaag
gagtttgtctcattattcgaatttgatccaacctatgcaaatgaatctgaagcatattct
aaatttattaaggagaacaagttaacactggatgctccaaccgaaaataataacattaaa
ttaaacgaaaagatacgaagacgacaattgagaacgacaaccataaataacgtcaccact
gatgctgatgcaactgaaatgtccttcgaatcaaaactagagatgatccagccattggtt
cagaggagatataacgagttaacggaatcatcacaggtttcaaagaataaggaaccccgt
atgatgccaaaagtgaagaaagaatccgtattaaatgcaaaagtgaagattaaagctcca
aaagcaaaaaggtcatacatcaagatgaagacagaagaactgccccaggagaaagaaaat
ggtccagaaatatattcaactgatgcaaacaatttgcaatatgacggtgaagaagaggac
gacttttatttcacaacctcggacgaagacgatttcaaagctaaaccaggtaggaggaag
aaacaaccacgtcttaatttgacacttcatcccccaagacaaacgatcactaacccttta
caagtacacaattccaaatataagtccctctctgattatttaaactcatttaaatcctta
gaagaagatatgaccattccagagtatgaacattatttggcggaacaaagggaaatcgta
ttgaagataaagagaggtttgagaagtggagctctcgttttcgataaagagacagattcc
ttacaacccatgacgacaaaggaagcaagactgattcaagtaaataagcccgatccgatt
tcttatcattataaagaacaaaatttaagcgtccatagagaatacttgattaaccatggc
atttatatgagtaagttatttgctagtgggaaaagagcaagaattgcaagagcaaaaaag
gtctctttgatggttgaacaacactttaaacaccttgctggtgcagatgagagaaaattg
aaagaagaggaacgacataggaaattattagctagaactgcaatgcaagcagtgaaaaaa
aggtggaacatggcagaaaaagcgtttagagttttaaaaagggatgaagaggatcaattg
aaaagaattcaggggaaagaacatctatcgaagatgttggaaaagagtactcaattatta
ggtgcacagttgaaccaaaataaagacggatcggtgacaaacggcgaagggttaacctcc
gatgaaaatatggatagtgatgatgacatgttatcatcatcctcggaaaatgagagtgaa
acctcaaatacagctgatcaattgtcaacctcggaaattaatgacgaatctctttcaatc
gaagaattgaaaaagaaatacaattcattggaagcaaataccatagatcagaataaaaat
gatgaactgacgtcagctaccgttaatgaaaaagattttgtattagatgaatctgataca
agctcattggatccagtaaccaccgacgaatctacttctgaggatgtatcggatgatgag
gttgaatccaccgaaaatccggctgatttgacttctctttttgctacaaatgagattacc
agtgatatggaagactcagatgattttgtaatgagtgaaccagaaagtataactccagca
tcagaaactcctgataagggagaacttcttccaaatgaagctggagctgaaaattcagag
caggtagttccaaacgagcagcagttgtctgtggttgatgttcctgttccctcattgtta
aggggtactttaagaacatatcaaaagcaaggtttaaactggcttgcatcactattcaat
aataatacgaacggtatcctagctgatgaaatgggtcttgggaaaacaattcaaacgatc
tctttattagcctatttagcgtgtgaaaagcagaattggggaccacatttgattgttgta
ccaacttctgtcttgctaaattgggaaatggaatttaaaagattctgcccaggtttgaaa
gtgttgacatattatggttctcctcagcaacgtaaggaaaagcggaaaggttggaataaa
ccagatgcatttcatgtttgtattgtatcgtatcaacttgttgttcaagaccaacattcg
tttaagagaaaaaaatggcaatatatggtattagatgaagcacataatatcaaaaatttt
agatcaaccagatggcaggcccttttgaattttaatactagaagaagattactggtgaca
ggtactcctcttcaaaataatctagcagaattatggtcattattgtatttcttgatgcca
caaactgttatagatggtaagaaagtttctggttttgcagatttggatgccttccaacag
tggttcggccgacctgtagataaacttattgagactggtgctggctaccagcaagatgct
gaaactaaaaagactgtttcgaagttacatcaggtgttaagaccttatttattgagaaga
ttaaaagcggatgtcgaaaaacaaatgcccgccaaatatgaacatattgtctattgtcga
ctatcaaaaagacaaagatttttatatgacgattttatgtcaagatctcaaacaaaggca
actttggcatcgggtaatttcatgtccatcgtgaactgtctgatgcaactcagaaaggtt
tgtaatcaccctgatttatttgaaatgcgacctattttgacatcattagaaatcggatct
tctgtccccagctattatacggatacaaatagattcgttcataaaatgttatcaaagaat
ggtagcttggctgccattgatctaaaaaatctaaacttgatatttaacgggaatgatgaa
ctgttaacgacaaatacggcagagaccatttcgaaactaaaatgtctcgatgaatttaca
aacgcgatatcttgccttcaaaaacaaacaaaatccgaagaacttcattctaactttaat
ttccaggatgcttctgcgttttataaatacttcaatagagaaaaaatagagcaagccatt
gaatcgttagaatttttcaagtatattaataccctacgagctgacacaaagccaatatat
ggcagtaatttgataaagttattgaatatctatgacaccaaagatgaaacaaagtcacaa
ttactggataatttcattacacctttacagacacgttttcttttggggaaagatataatc
gaaaaatatgcagttattacgccgggtgccgtcactttggatatgagatatttaacattg
ggtttgaatgatgacagcttgcttgatcaagcagcaaaatctacattaatccaagaactg
catgaggtagataacccatttcaccaactacaaactaaattgacgatagcattcccagat
aagtccttattacaatatgattgtggtaaactgcagaaacttgcgaaactattgcaggat
ttgaaagacaatggccacagagctctaatttttactcaaatgacaaaagttttagatgtt
ttagaaagatttcttaattatcacgggtatatttatatgagattggatggtgctactaag
gtggaagatcgtcaaattttgacggaaagatttaataatgacccaagggttacggtattc
attttatcaagtaggtctggtggtttgggtatcaatttaactggtgctgataccgtcata
ttttatgattccgattggaacccagctatggataaacaatgtcaggatcgttgtcataga
attgggcaaactcgtgacgtgcatatatatagatttgtcagtgaacatactattgaaagc
aacattcttaagaaagcaaaccaaaaaagacaattagataatgttgttatccaaaagggg
gatttcactactgactattttaccaaactgtctgttcgtgaccttttggggtctgaagac
aacgatggtgctaaggaaactgaaggtccattattattggatgatcccaatattactaaa
gaccctcgtcatctggagaaacttttggcccaagcagaagatgaagatgatgtgaaggca
gcaaatcaagcattgagagaggttgaggttgatgatgaagatttcactgaagacccaaca
aaattgaactcacatgaagataagatagaagagctcgaggatgagtacgaaggtaccggc
cacgttgaagaatacatgatcaggtatattgccaatgggaattattactag
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