Naumovozyma castellii: NCAS_0G01320
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Entry
NCAS_0G01320 CDS
T02233
Symbol
NCAS0G01320
Name
(RefSeq) exosome non-catalytic core subunit CSL4
KO
K07573
exosome complex component CSL4
Organism
ncs
Naumovozyma castellii
Pathway
ncs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCAS_0G01320 (NCAS0G01320)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncs03019
]
NCAS_0G01320 (NCAS0G01320)
Messenger RNA biogenesis [BR:
ncs03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
NCAS_0G01320 (NCAS0G01320)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
NCAS_0G01320 (NCAS0G01320)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
CSL4_N
S1_RRP4
CRT10
Motif
Other DBs
NCBI-GeneID:
96904685
NCBI-ProteinID:
XP_003677372
UniProt:
G0VHY5
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All DBs
Position
7:237441..238247
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AA seq
268 aa
AA seq
DB search
MLSNRYICGHGTKLLDYKYNGMSIKALTATLLGDVSVEEVKEGTQDDESESNGEETEKDK
EIDNDSNNEETPTDSKIDRIVKTVKVSVIQETKSSKKSLVDDNFANNLPKEGDIVLTRVT
RISLQRANVEILAVENANVPVDSGVGSNGSGIVAAGGGSGAATFSVSQVSSDLGETFRGL
IRSQDVRATERDRVKIMDCFKPGDIVRAQVLSLGDGTNYYLTTARNDLGVVFARAANGAG
GLMYATDWQTMTVPSTGLTEKRKCAKPL
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctaacagatacatttgcggccatggtactaagcttttagattacaaatacaac
ggaatgtccataaaggctttaacagccacgcttctaggagacgtttctgttgaggaggtt
aaggaggggacgcaggatgacgaatctgaaagcaatggagaagaaactgaaaaagacaaa
gagatagataacgattcaaataatgaagaaactccaactgattctaagattgatagaatt
gtcaagacagtaaaagtctctgtcatacaggaaacaaagtcctcaaagaaaagcttagtg
gatgataattttgccaacaatcttccgaaggaaggtgatattgttctcacgagagttact
cgtatatctttacaaagggctaacgttgagattttggccgttgaaaatgcaaatgtccca
gtggatagtggtgttggtagtaatgggtcaggtatagtggcagcaggtggtggttcaggt
gccgccaccttctcagtgtcacaagtttcttcagatcttggtgaaacatttagaggttta
atcagatcacaagatgtgagggccactgaaagagatagagtgaaaatcatggactgtttt
aagccgggagatattgtcagggctcaagtgttgtctctaggtgatggtacaaattactat
ttaactacagcaagaaacgatttgggtgtggtatttgccagagctgccaatggtgcaggt
ggattaatgtatgctacagattggcaaacaatgactgtaccatctactgggcttaccgag
aaacgtaaatgtgccaaaccattatag
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