KEGG   Naumovozyma castellii: NCAS_0G02250
Entry
NCAS_0G02250      CDS       T02233                                 
Symbol
NCAS0G02250
Name
(RefSeq) uncharacterized protein
  KO
K12879  THO complex subunit 2
Organism
ncs  Naumovozyma castellii
Pathway
ncs03013  Nucleocytoplasmic transport
ncs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ncs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NCAS_0G02250 (NCAS0G02250)
  09122 Translation
   03013 Nucleocytoplasmic transport
    NCAS_0G02250 (NCAS0G02250)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncs03019]
    NCAS_0G02250 (NCAS0G02250)
   03041 Spliceosome [BR:ncs03041]
    NCAS_0G02250 (NCAS0G02250)
Messenger RNA biogenesis [BR:ncs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     NCAS_0G02250 (NCAS0G02250)
Spliceosome [BR:ncs03041]
 Complex C
  Other components
   EJC/TREX
    NCAS_0G02250 (NCAS0G02250)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    NCAS_0G02250 (NCAS0G02250)
SSDB
Motif
Pfam: THOC2_N Tho2 Thoc2
Other DBs
NCBI-GeneID: 96904777
NCBI-ProteinID: XP_003677464
UniProt: G0VI77
LinkDB
Position
7:complement(397531..402378)
AA seq 1615 aa
MAETVSILDRLNTLAKKTPVNNRSIFTKDVVNHWDSSNRVLYSQFQALESDEEREKWLKR
FFIELFQILLQENTPERNNFPIVAIATFINDISKLTPTASKIPTKSLMGKMFIAASLVVP
SLTIDRSDDLLTLTKAIPNIHEEVFKFSWISTKLTIKPQTTLLRHLMKKSKYELKKFNLF
FENSVGYSQLSILFFTAYSDQDRLQKLEFYLEQMYSIIGQYSLDSMRCLDLFLLISNEYV
TEHYHFMLKFLQLSDYWPLEGRLENIIASNLIAFFLVEGEKKYKKGAENDQKSSTYLDMC
CILIKNGFINFNTLWNNLGPTIEELETSLDDFEKHLEEESMKGIENPLAMAAALSMKDDD
YDPRHDPEQTKTESEEQKKSEVQKESKQNTKAEENILKVINSGKIKLLKRVLVHGYLQPI
IPILQRYPRIIHIDDELPRLVSRILSQMILPLYNKTKFGNLSSSPLSNSSRVTRIDNELL
STKPRLIDELRTHDPFQEFEFNTVFTFYYPEWKDGISDVETIEDLIKRSHELFTLVGPSL
AKDPQFIAKICRIGIFDINEDGSSTEVIAKWIDYARKFLFPTIPVLGINPIAATEIYELM
KYFPFERRYFMYNEMITKLSQDSLIIKVGFNKAERDAKNILKALSTDTVDKEARNLSKLI
STNPLATLVHTVKQIENYDKVSELVVITTKFFNDFAYDVLQYVLLLRLTHPRNAVQEDGV
NQAMWVQRLSVFIAGLAKRCPKMDLTNIVTYLVKTLHAGNVIAVSILKELIVTVGGVRDF
NEVNKKQLIMLNSGNQVKRGGRKLIFDFRDDNVELASNLLSLFVAQDSISEIILLLYNLN
LEVNTGTSHYKILSSRCDEMNTLLWSFIELIKFCLTNEDFEKNILPFDVFINEFHMSSAW
VFHIWRDYFDSQYRKLEESPEKERDTKINIQHMDKVLNGTQYTGVNFEQLSKDLFITFWR
LSLYDIHFDKGLYDENKVSLENEISPTLSSRKRHTLKNQIKETFVDRISHQRTFNKTIQM
LSDKSKIWYENFDNSEIIAFLQACIIPRALFTPSDALYASYFLLQVFPLDQLMKIYEILF
GSRILSNLLFSCTSFEASNLGMFFANIFESMEQTRQTQDLPSEYRIKIYEWYSSLTEQLC
ELLGEKNYMSIRNGIEFMKQTSAIFPIVDSHVTVVIGSLEKNLVDEEREDIKLPSNALLG
HLKARLRKNVVKDEDMIQLSEHELKLKQLHDSELQEIKDYETLVANEKKQVELRKQIEQH
KLNRKAAEEVQPQSDNERNENMDDEAKNFDWPLGKVLKYIDGVCYDLNNGLLSRATEVID
DKVEQDKLQQLMKQDISNAEFRVAVYDCFKRYFVSLVKWPNNPEFTEKLANLKQTSQHIV
RDMDTASADLYSDSTAASSNRTSRYNVSDASKEKEPPKSYRTKYAGDRDSKKDGSKSPRG
YQREPRTVPKEPVSFKSTQPGGTLDRTKTQQNRTSGQGQGRTFAPEKRDRTSRESTRATD
YSRPRNIPEKPSRDSFKNPNDIAPRQMRSFGRESKKHNTPPPFDDRGAKRYKQEERGSRE
SQYRNAPRDSLKDSSRYNRPGQDSGGNSNKKKDDTPRLPQGPKGAGSGPSSRYQR
NT seq 4848 nt   +upstreamnt  +downstreamnt
atggcagaaaccgtttcaatccttgatagattgaatacgcttgccaagaaaacacctgta
aataacagatccatcttcaccaaagatgtggtcaaccactgggattcaagcaatcgagtt
ttatactcccaatttcaagcacttgaatctgatgaagaaagagagaaatggcttaagcgt
ttttttatagaattattccaaatactattacaagaaaacacaccagaaagaaacaatttc
ccgattgttgcgattgctactttcatcaatgacatttctaaattaactccaactgcatca
aaaattccgacgaaatcattaatgggaaagatgtttattgccgcatcccttgttgttccg
tccttaactattgatagatcagacgatctgctaactctcactaaggcaattccaaatatt
catgaagaagtctttaaattcagttggatatctaccaagttaacaataaaaccccaaact
acactgttaagacacctgatgaagaaatcaaaatatgaattaaagaaattcaacctgttt
tttgaaaattcagttggttattctcaattatcaatacttttctttacagcatattctgat
caagatcgattacaaaaattagagttttatttggaacaaatgtattccattatcggacaa
tactccttagattcaatgagatgtctggatttgtttctattgatctctaacgaatatgtc
actgaacattatcattttatgctgaaattcttacaattatctgattactggccattagaa
ggtaggctagaaaatataatagcgtcaaatctgattgccttcttcttggttgaaggtgaa
aagaaatacaagaaaggagctgaaaacgatcagaagtcgagcacgtatttggatatgtgc
tgtatactgatcaagaatggatttattaatttcaataccctttggaataacttaggtcca
actattgaagaattagaaacatctttagatgattttgaaaaacacttagaggaagaatct
atgaaagggattgaaaatccactggctatggctgctgcattgtcaatgaaagatgatgat
tacgacccaagacatgatcctgaacaaacaaagactgaaagcgaagaacagaagaagagt
gaagtacagaaggagtccaaacaaaacactaaagcggaagaaaatattctcaaggtcata
aatagcggaaagattaaacttttgaagagagtgctggtccacggttatttacaaccaatt
attccaattttacaaagatacccaaggataatacacatagatgatgaacttcccagatta
gtctcaagaatattatctcaaatgatcttaccattatacaataagacaaagttcggaaac
ttatcttcttcacccttaagtaacagctctcgtgtaacaaggattgacaatgaattgctt
tctactaaacctagattgattgatgaacttagaactcatgatccatttcaagaatttgaa
ttcaatacagttttcactttttactatcctgaatggaaagatggtatatcagatgtggaa
actattgaagatctaattaagaggagtcatgaattatttaccttagtaggtccttcctta
gcgaaagatccacagttcatagcaaaaatatgccgtattggaatttttgatatcaatgag
gatggatcttcgacagaagttattgctaaatggatcgattatgctagaaaatttctattt
cctaccattccggttttaggtattaatcccattgctgccactgaaatatatgaattgatg
aaatatttcccgtttgagagaagatatttcatgtataatgaaatgataacaaaattgtca
caagactctttaatcatcaaggttggttttaataaagctgaaagagatgctaaaaatatc
ttgaaggcattgagtacagatacagttgacaaggaggcaaggaatttgtcaaaattgatt
tccacgaaccctttggctactctagttcataccgtaaaacaaattgaaaattatgataag
gtttctgaattggtcgttataacaaccaaattttttaatgatttcgcctacgatgttctt
cagtatgtgttattattaaggctaactcatccaagaaatgcagtacaagaggatggtgtc
aaccaagcaatgtgggtccagcgtttatctgtatttatcgccggtctagcaaaacgatgt
cccaagatggacctaacgaatattgttacctatctcgtgaagacgctgcacgcaggtaat
gtgattgcagtctccattttaaaggagttaatcgtaacagttggtggtgtaagagatttt
aatgaagtcaataaaaaacaattgataatgctaaactcagggaaccaagtcaaacgtggt
ggtagaaaattaatatttgatttcagggatgataatgttgagttagcttcaaatttactc
tctttgttcgttgctcaagattccatctctgagataattttgttgttatataatttgaat
ctggaagttaacacagggacatctcattataagattctgtcatcaagatgtgatgaaatg
aatacgctcttatggtcatttattgagttaattaaattctgtttgactaacgaggacttc
gaaaagaatatcctgccatttgatgtatttattaatgaattccatatgtcttccgcgtgg
gtattccacatttggagagattattttgatagtcaatataggaaattggaagaatctccc
gagaaagaaagggatacaaaaattaacattcagcacatggataaagtacttaatggaact
caatatacaggtgtcaacttcgaacaattgtcaaaggatttgtttatcacattctggaga
ttatcgctatatgatattcattttgacaaaggattatatgatgagaataaggtttccctg
gaaaatgaaatttccccaactctatcttctagaaagaggcataccctaaaaaaccaaatt
aaagaaacattcgttgatcgtatctcacatcaaagaacttttaataagacaattcaaatg
ctaagtgataaatcaaagatttggtacgagaactttgataattctgaaattatagcgttt
ttgcaagcatgcattattccaagggcgttattcactccatctgacgctctctatgcttcg
tatttcttacttcaggtctttccattagatcagttaatgaaaatatatgaaatactgttc
ggttctaggattttatcgaatttattgtttagttgcactagctttgaagccagtaacttg
gggatgttttttgcaaacatatttgaatcaatggagcaaacgagacaaacgcaagattta
ccttcagaatatagaatcaaaatatatgaatggtatagcagtttaacggagcaattgtgt
gaattattaggtgagaaaaattacatgtccattagaaatggtattgaattcatgaaacaa
acatctgccatatttccaatcgttgactcacatgttacggttgttattggtagtttggag
aagaatttagttgacgaggagcgtgaagatataaagcttccaagtaacgccctcttaggc
catttaaaggctcgtctcaggaaaaatgtggtcaaggacgaagatatgatccaattaagt
gagcatgaattaaaactcaagcaattgcatgattctgaactccaggagattaaagattac
gaaacattagttgctaatgagaaaaaacaagttgaattaaggaaacaaatagaacagcat
aaactcaatagaaaggctgccgaagaagttcaacctcaaagtgataacgagagaaatgaa
aatatggatgacgaagctaaaaactttgactggccactaggtaaagttttgaagtatatt
gatggagtttgctacgatcttaacaacgggctgctatctagagccactgaagttattgat
gataaagttgagcaagacaagttgcagcaattaatgaaacaagacatttcaaatgctgaa
tttagggtggcagtttacgactgtttcaaaagatattttgtttctttagtcaaatggcct
aacaatcctgaatttaccgagaaattagccaacttgaagcaaacgtcacaacatatagtc
cgtgacatggatactgcctcagcagatttatactcagattccacggcagcatcgtccaat
agaaccagcagatataatgtatctgatgcctcgaaggagaaggagcctccaaaatcatac
agaactaagtatgcaggcgatagagattctaagaaagatggatctaaaagcccaagggga
tatcaaagagaaccaaggacagtacccaaagaacctgtgtcattcaagagcacccaacca
ggtggcactttggacagaacgaagactcaacaaaatagaacatcaggccagggacaagga
agaacgtttgccccagaaaagagagatagaacaagtagagaatctaccagggcaaccgat
tattctcgtcctaggaatattccagagaagccgtcacgcgactcattcaagaatccaaat
gatatagctccacgtcaaatgagaagctttggaagggaatcaaagaagcataacactcct
cctccttttgatgataggggtgcgaagagatataagcaagaagagcgtggtagtagagag
tcacaatacagaaacgctcctagagatagtttaaaggatagttctaggtataacaggcct
ggtcaggacagcggtggaaatagcaataaaaaaaaagatgacacaccaagactaccacaa
ggaccgaaaggtgcaggctctgggcccagtagtaggtaccaaaggtga

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