Naumovozyma castellii: NCAS_0G02250
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Entry
NCAS_0G02250 CDS
T02233
Symbol
NCAS0G02250
Name
(RefSeq) uncharacterized protein
KO
K12879
THO complex subunit 2
Organism
ncs
Naumovozyma castellii
Pathway
ncs03013
Nucleocytoplasmic transport
ncs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCAS_0G02250 (NCAS0G02250)
09122 Translation
03013 Nucleocytoplasmic transport
NCAS_0G02250 (NCAS0G02250)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncs03019
]
NCAS_0G02250 (NCAS0G02250)
03041 Spliceosome [BR:
ncs03041
]
NCAS_0G02250 (NCAS0G02250)
Messenger RNA biogenesis [BR:
ncs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
NCAS_0G02250 (NCAS0G02250)
Spliceosome [BR:
ncs03041
]
Complex C
Other components
EJC/TREX
NCAS_0G02250 (NCAS0G02250)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
NCAS_0G02250 (NCAS0G02250)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC2_N
Tho2
Thoc2
Motif
Other DBs
NCBI-GeneID:
96904777
NCBI-ProteinID:
XP_003677464
UniProt:
G0VI77
LinkDB
All DBs
Position
7:complement(397531..402378)
Genome browser
AA seq
1615 aa
AA seq
DB search
MAETVSILDRLNTLAKKTPVNNRSIFTKDVVNHWDSSNRVLYSQFQALESDEEREKWLKR
FFIELFQILLQENTPERNNFPIVAIATFINDISKLTPTASKIPTKSLMGKMFIAASLVVP
SLTIDRSDDLLTLTKAIPNIHEEVFKFSWISTKLTIKPQTTLLRHLMKKSKYELKKFNLF
FENSVGYSQLSILFFTAYSDQDRLQKLEFYLEQMYSIIGQYSLDSMRCLDLFLLISNEYV
TEHYHFMLKFLQLSDYWPLEGRLENIIASNLIAFFLVEGEKKYKKGAENDQKSSTYLDMC
CILIKNGFINFNTLWNNLGPTIEELETSLDDFEKHLEEESMKGIENPLAMAAALSMKDDD
YDPRHDPEQTKTESEEQKKSEVQKESKQNTKAEENILKVINSGKIKLLKRVLVHGYLQPI
IPILQRYPRIIHIDDELPRLVSRILSQMILPLYNKTKFGNLSSSPLSNSSRVTRIDNELL
STKPRLIDELRTHDPFQEFEFNTVFTFYYPEWKDGISDVETIEDLIKRSHELFTLVGPSL
AKDPQFIAKICRIGIFDINEDGSSTEVIAKWIDYARKFLFPTIPVLGINPIAATEIYELM
KYFPFERRYFMYNEMITKLSQDSLIIKVGFNKAERDAKNILKALSTDTVDKEARNLSKLI
STNPLATLVHTVKQIENYDKVSELVVITTKFFNDFAYDVLQYVLLLRLTHPRNAVQEDGV
NQAMWVQRLSVFIAGLAKRCPKMDLTNIVTYLVKTLHAGNVIAVSILKELIVTVGGVRDF
NEVNKKQLIMLNSGNQVKRGGRKLIFDFRDDNVELASNLLSLFVAQDSISEIILLLYNLN
LEVNTGTSHYKILSSRCDEMNTLLWSFIELIKFCLTNEDFEKNILPFDVFINEFHMSSAW
VFHIWRDYFDSQYRKLEESPEKERDTKINIQHMDKVLNGTQYTGVNFEQLSKDLFITFWR
LSLYDIHFDKGLYDENKVSLENEISPTLSSRKRHTLKNQIKETFVDRISHQRTFNKTIQM
LSDKSKIWYENFDNSEIIAFLQACIIPRALFTPSDALYASYFLLQVFPLDQLMKIYEILF
GSRILSNLLFSCTSFEASNLGMFFANIFESMEQTRQTQDLPSEYRIKIYEWYSSLTEQLC
ELLGEKNYMSIRNGIEFMKQTSAIFPIVDSHVTVVIGSLEKNLVDEEREDIKLPSNALLG
HLKARLRKNVVKDEDMIQLSEHELKLKQLHDSELQEIKDYETLVANEKKQVELRKQIEQH
KLNRKAAEEVQPQSDNERNENMDDEAKNFDWPLGKVLKYIDGVCYDLNNGLLSRATEVID
DKVEQDKLQQLMKQDISNAEFRVAVYDCFKRYFVSLVKWPNNPEFTEKLANLKQTSQHIV
RDMDTASADLYSDSTAASSNRTSRYNVSDASKEKEPPKSYRTKYAGDRDSKKDGSKSPRG
YQREPRTVPKEPVSFKSTQPGGTLDRTKTQQNRTSGQGQGRTFAPEKRDRTSRESTRATD
YSRPRNIPEKPSRDSFKNPNDIAPRQMRSFGRESKKHNTPPPFDDRGAKRYKQEERGSRE
SQYRNAPRDSLKDSSRYNRPGQDSGGNSNKKKDDTPRLPQGPKGAGSGPSSRYQR
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaccgtttcaatccttgatagattgaatacgcttgccaagaaaacacctgta
aataacagatccatcttcaccaaagatgtggtcaaccactgggattcaagcaatcgagtt
ttatactcccaatttcaagcacttgaatctgatgaagaaagagagaaatggcttaagcgt
ttttttatagaattattccaaatactattacaagaaaacacaccagaaagaaacaatttc
ccgattgttgcgattgctactttcatcaatgacatttctaaattaactccaactgcatca
aaaattccgacgaaatcattaatgggaaagatgtttattgccgcatcccttgttgttccg
tccttaactattgatagatcagacgatctgctaactctcactaaggcaattccaaatatt
catgaagaagtctttaaattcagttggatatctaccaagttaacaataaaaccccaaact
acactgttaagacacctgatgaagaaatcaaaatatgaattaaagaaattcaacctgttt
tttgaaaattcagttggttattctcaattatcaatacttttctttacagcatattctgat
caagatcgattacaaaaattagagttttatttggaacaaatgtattccattatcggacaa
tactccttagattcaatgagatgtctggatttgtttctattgatctctaacgaatatgtc
actgaacattatcattttatgctgaaattcttacaattatctgattactggccattagaa
ggtaggctagaaaatataatagcgtcaaatctgattgccttcttcttggttgaaggtgaa
aagaaatacaagaaaggagctgaaaacgatcagaagtcgagcacgtatttggatatgtgc
tgtatactgatcaagaatggatttattaatttcaataccctttggaataacttaggtcca
actattgaagaattagaaacatctttagatgattttgaaaaacacttagaggaagaatct
atgaaagggattgaaaatccactggctatggctgctgcattgtcaatgaaagatgatgat
tacgacccaagacatgatcctgaacaaacaaagactgaaagcgaagaacagaagaagagt
gaagtacagaaggagtccaaacaaaacactaaagcggaagaaaatattctcaaggtcata
aatagcggaaagattaaacttttgaagagagtgctggtccacggttatttacaaccaatt
attccaattttacaaagatacccaaggataatacacatagatgatgaacttcccagatta
gtctcaagaatattatctcaaatgatcttaccattatacaataagacaaagttcggaaac
ttatcttcttcacccttaagtaacagctctcgtgtaacaaggattgacaatgaattgctt
tctactaaacctagattgattgatgaacttagaactcatgatccatttcaagaatttgaa
ttcaatacagttttcactttttactatcctgaatggaaagatggtatatcagatgtggaa
actattgaagatctaattaagaggagtcatgaattatttaccttagtaggtccttcctta
gcgaaagatccacagttcatagcaaaaatatgccgtattggaatttttgatatcaatgag
gatggatcttcgacagaagttattgctaaatggatcgattatgctagaaaatttctattt
cctaccattccggttttaggtattaatcccattgctgccactgaaatatatgaattgatg
aaatatttcccgtttgagagaagatatttcatgtataatgaaatgataacaaaattgtca
caagactctttaatcatcaaggttggttttaataaagctgaaagagatgctaaaaatatc
ttgaaggcattgagtacagatacagttgacaaggaggcaaggaatttgtcaaaattgatt
tccacgaaccctttggctactctagttcataccgtaaaacaaattgaaaattatgataag
gtttctgaattggtcgttataacaaccaaattttttaatgatttcgcctacgatgttctt
cagtatgtgttattattaaggctaactcatccaagaaatgcagtacaagaggatggtgtc
aaccaagcaatgtgggtccagcgtttatctgtatttatcgccggtctagcaaaacgatgt
cccaagatggacctaacgaatattgttacctatctcgtgaagacgctgcacgcaggtaat
gtgattgcagtctccattttaaaggagttaatcgtaacagttggtggtgtaagagatttt
aatgaagtcaataaaaaacaattgataatgctaaactcagggaaccaagtcaaacgtggt
ggtagaaaattaatatttgatttcagggatgataatgttgagttagcttcaaatttactc
tctttgttcgttgctcaagattccatctctgagataattttgttgttatataatttgaat
ctggaagttaacacagggacatctcattataagattctgtcatcaagatgtgatgaaatg
aatacgctcttatggtcatttattgagttaattaaattctgtttgactaacgaggacttc
gaaaagaatatcctgccatttgatgtatttattaatgaattccatatgtcttccgcgtgg
gtattccacatttggagagattattttgatagtcaatataggaaattggaagaatctccc
gagaaagaaagggatacaaaaattaacattcagcacatggataaagtacttaatggaact
caatatacaggtgtcaacttcgaacaattgtcaaaggatttgtttatcacattctggaga
ttatcgctatatgatattcattttgacaaaggattatatgatgagaataaggtttccctg
gaaaatgaaatttccccaactctatcttctagaaagaggcataccctaaaaaaccaaatt
aaagaaacattcgttgatcgtatctcacatcaaagaacttttaataagacaattcaaatg
ctaagtgataaatcaaagatttggtacgagaactttgataattctgaaattatagcgttt
ttgcaagcatgcattattccaagggcgttattcactccatctgacgctctctatgcttcg
tatttcttacttcaggtctttccattagatcagttaatgaaaatatatgaaatactgttc
ggttctaggattttatcgaatttattgtttagttgcactagctttgaagccagtaacttg
gggatgttttttgcaaacatatttgaatcaatggagcaaacgagacaaacgcaagattta
ccttcagaatatagaatcaaaatatatgaatggtatagcagtttaacggagcaattgtgt
gaattattaggtgagaaaaattacatgtccattagaaatggtattgaattcatgaaacaa
acatctgccatatttccaatcgttgactcacatgttacggttgttattggtagtttggag
aagaatttagttgacgaggagcgtgaagatataaagcttccaagtaacgccctcttaggc
catttaaaggctcgtctcaggaaaaatgtggtcaaggacgaagatatgatccaattaagt
gagcatgaattaaaactcaagcaattgcatgattctgaactccaggagattaaagattac
gaaacattagttgctaatgagaaaaaacaagttgaattaaggaaacaaatagaacagcat
aaactcaatagaaaggctgccgaagaagttcaacctcaaagtgataacgagagaaatgaa
aatatggatgacgaagctaaaaactttgactggccactaggtaaagttttgaagtatatt
gatggagtttgctacgatcttaacaacgggctgctatctagagccactgaagttattgat
gataaagttgagcaagacaagttgcagcaattaatgaaacaagacatttcaaatgctgaa
tttagggtggcagtttacgactgtttcaaaagatattttgtttctttagtcaaatggcct
aacaatcctgaatttaccgagaaattagccaacttgaagcaaacgtcacaacatatagtc
cgtgacatggatactgcctcagcagatttatactcagattccacggcagcatcgtccaat
agaaccagcagatataatgtatctgatgcctcgaaggagaaggagcctccaaaatcatac
agaactaagtatgcaggcgatagagattctaagaaagatggatctaaaagcccaagggga
tatcaaagagaaccaaggacagtacccaaagaacctgtgtcattcaagagcacccaacca
ggtggcactttggacagaacgaagactcaacaaaatagaacatcaggccagggacaagga
agaacgtttgccccagaaaagagagatagaacaagtagagaatctaccagggcaaccgat
tattctcgtcctaggaatattccagagaagccgtcacgcgactcattcaagaatccaaat
gatatagctccacgtcaaatgagaagctttggaagggaatcaaagaagcataacactcct
cctccttttgatgataggggtgcgaagagatataagcaagaagagcgtggtagtagagag
tcacaatacagaaacgctcctagagatagtttaaaggatagttctaggtataacaggcct
ggtcaggacagcggtggaaatagcaataaaaaaaaagatgacacaccaagactaccacaa
ggaccgaaaggtgcaggctctgggcccagtagtaggtaccaaaggtga
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integrated database retrieval system