Naumovozyma castellii: NCAS_0G02560
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Entry
NCAS_0G02560 CDS
T02233
Symbol
NCAS0G02560
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ncs
Naumovozyma castellii
Pathway
ncs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCAS_0G02560 (NCAS0G02560)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncs03041
]
NCAS_0G02560 (NCAS0G02560)
03009 Ribosome biogenesis [BR:
ncs03009
]
NCAS_0G02560 (NCAS0G02560)
Enzymes [BR:
ncs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCAS_0G02560 (NCAS0G02560)
Spliceosome [BR:
ncs03041
]
Complex A
U1 snRNP components
U1 related factors
NCAS_0G02560 (NCAS0G02560)
Complex B
NCAS_0G02560 (NCAS0G02560)
Ribosome biogenesis [BR:
ncs03009
]
Eukaryotic type
Pre-60S particles
Helicases
NCAS_0G02560 (NCAS0G02560)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
Motif
Other DBs
NCBI-GeneID:
11528660
NCBI-ProteinID:
XP_003677495
UniProt:
G0VIA8
LinkDB
All DBs
Position
7:join(457574..458852,459621..460012)
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AA seq
556 aa
AA seq
DB search
MSFGGGRDQQFNKSNYNSRGGDSRGFRASDRNSYTHQGNGRPYEGGRGGGRPQFSGPQEL
VKPNWEQELPNLPTFEKNFYVEHETVQNRTEAEIAQFRKENEMTISGHDIPKPITTFDEA
GFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIVHINAQ
PLLAPGDGPIVLVLAPTRELAVQIQKECSKFGHSSRIRNTCVYGGVPRGQQIRDLSRGSE
IVIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS
ATWPKEVKQLASDYLNDPIQVQIGSLELSASHNITQLVEVVSEFEKRDRLLKHLETASQD
QESKILIFASTKRTCDEVTKYLREDGWPALAIHGDKDQRERDWVLEEFRSGRSPIMVATD
VAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEGNKSLGAPLISI
MREAKQNIPEDLLKYDRRARGPHPRYGGGGYGGRGGYGRGGRGGYGRGNGGYGGGRGGYG
GSRDGGWNRNGGGNRY
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcggtggcggtagagatcaacaattcaacaaatccaattataactcacgtgga
ggagactcccgtggtttcagagcttcagacagaaactcatatacccatcaaggtaacggt
cgtccttacgaaggcggtagaggtggtggtagacctcaattcagtggtcctcaagaacta
gttaagccaaactgggaacaagaattgccaaacttaccaacttttgaaaaaaatttctac
gtcgaacatgaaaccgttcaaaatagaactgaagctgaaattgctcaatttagaaaggaa
aatgaaatgaccatctctggtcatgacattccaaagccaatcacaactttcgatgaggct
gggttccctgactacgtcttaaacgaagtcaaagctgaagggttcgacaaaccaactggt
attcaatgtcaaggttggccaatggctttatccggtagagatatgattggtgttgctgct
actggttctggtaagactttgtcgtattgtttgccaggtattgtccatatcaatgctcaa
cctttgttggctccaggtgatggtccaattgtgttggtcttggctccaacaagagaatta
gctgttcaaattcaaaaggaatgttccaagtttggtcattcttctagaattagaaacact
tgtgtttacggtggtgtccctcgtggtcaacaaattagagacttatccagagggtcagaa
atcgttattgccactccaggtagattgattgatatgttggaaatcggtaagactaacttg
aagagagtcacttatttggtgttagatgaagctgatagaatgttagatatggggttcgaa
cctcaaattagaaagattgtcgatcaaattagaccagatagacaaactttaatgtggtcc
gctacttggccaaaggaagtcaagcaattggctagtgattatttgaatgatccaattcaa
gtccaaattggttctttggaattatctgcttctcacaacattactcaattagtcgaagtc
gtgtccgaattcgaaaagagagatcgtttgttgaaacatttggaaactgcttctcaagat
caagaatctaagattttgatttttgcctctacaaagagaacttgtgatgaagttactaaa
tatttgagagaagatggatggcctgctttggctatccatggtgataaagaccaaagagaa
agagattgggtcttggaagaatttagatctggtagatctcctattatggttgccactgat
gtggccgctagaggtattgatgtcaagggtattaactacgttatcaattatgacatgcca
ggtaacattgaagattatgtacacagaattggtagaactggtagagctggtgccaccggt
actgctatttctttcttcactgaaggtaataagagtctaggtgctccattaatatcaatt
atgagagaagctaaacaaaatattccggaagatttattgaaatatgatagaagagctcgt
ggtccacacccaagatacggtggtggtggttacggtggccgtggtggttatggccgtggt
ggtcgtggcggttacggtcgtggtaatggtggctatggtggtggccgtggtggttacggt
ggttcaagagatggtggatggaacagaaacggtggtggtaacagatattag
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