Naumovozyma castellii: NCAS_0H00600
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Entry
NCAS_0H00600 CDS
T02233
Symbol
NCAS0H00600
Name
(RefSeq) cleavage polyadenylation factor subunit FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ncs
Naumovozyma castellii
Pathway
ncs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NCAS_0H00600 (NCAS0H00600)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncs03019
]
NCAS_0H00600 (NCAS0H00600)
Messenger RNA biogenesis [BR:
ncs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
NCAS_0H00600 (NCAS0H00600)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
96905050
NCBI-ProteinID:
XP_003677720
UniProt:
G0VIP4
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Position
8:100603..101631
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AA seq
342 aa
AA seq
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MSSSEDEDDKFLYGSDTEEAPSSNKRSLDTIDEQTKRRKVDTPQQPTATIESDEYDSESD
DESDVEFILSTGPDIHRLDSNSTLVASSTTPVSTIQPVVNAISVATDELAKDDETQTPMT
KETTTATNGYSINNDETATLTSDSLKNNNTMLGSIDLDKDGLFEGESITNIDPEVLREKP
WRQPGANLSDYFNYGFNEYTWTEYLNRQEKLRADYNPRRILMGLMTLQQQGRLDPQPKQN
QTNQNIPSMASPMPNTNQPQMNMNMNYQSIPNNMMNNQNKPNNAAPPMLPAGFPPAPFGM
FGGFGFPPPPFMAQQPNLNPNQNSNPNPNQSPNSIPMLPNKK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgagctccagtgaagacgaagatgacaaatttctatacggttccgatacagaagaggca
ccatcctcaaataagagaagtctagatacaattgacgagcaaaccaaacgaagaaaagta
gacacaccgcaacagcccacagcgaccatagaatcagacgaatatgattcggaatcagac
gatgaatccgacgtagaatttattctttcaacggggccggatattcataggttggattca
aatagcaccctcgtggcatcaagtacgacacccgtcagtaccatacaacccgttgttaat
gcaattagtgtggctacggatgaactcgcaaaagatgatgagactcaaacgcccatgaca
aaggaaacaacaacggcaactaatggttactctataaataatgatgaaactgccacgttg
acctccgattcattgaagaataataatacaatgttggggtccatcgatttggataaagat
ggattgtttgaaggtgaatccataacaaatatcgacccagaagtgttaagagagaaacct
tggagacaaccgggagctaatttatctgattattttaattatgggttcaatgaatacaca
tggacggaatatctaaataggcaagaaaaattgagagctgattataacccaagaaggata
ttgatggggttgatgacattgcaacagcaaggtagattggaccctcaacctaaacaaaat
caaacaaaccagaatataccaagcatggcttctccaatgccaaacacaaatcaaccccaa
atgaatatgaatatgaattatcaaagcataccgaataatatgatgaacaaccaaaataaa
cccaataatgcagctcctccaatgctacctgcaggtttcccacctgccccatttggtatg
tttggaggattcgggtttccaccaccaccattcatggcacagcaaccaaatctaaatcca
aaccaaaattcaaatccaaatccaaaccaaagtccaaactcaataccaatgttgccaaac
aagaaatag
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