Naumovozyma castellii: NCAS_0H01370
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Entry
NCAS_0H01370 CDS
T02233
Symbol
NCAS0H01370
Name
(RefSeq) endonuclease
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
ncs
Naumovozyma castellii
Pathway
ncs03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
NCAS_0H01370 (NCAS0H01370)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncs03400
]
NCAS_0H01370 (NCAS0H01370)
DNA repair and recombination proteins [BR:
ncs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
NCAS_0H01370 (NCAS0H01370)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
SLX1_C
T5orf172
DmmA-like_C
zf-RING-like
Integrin_B_tail
Motif
Other DBs
NCBI-GeneID:
96905126
NCBI-ProteinID:
XP_003677796
UniProt:
G0VIX0
LinkDB
All DBs
Position
8:complement(262285..263208)
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AA seq
307 aa
AA seq
DB search
MTQTVGSQPKTRTQFYCCYLLQSISKRQSFYIGSTPDPPKRLRQHNGILSKGGAYRTRRE
GSRPWEMICIVYGFPNKISALQFEHAWQHGYQTHYIKAADRIVQNKNGGRTIHHKLVLIR
QLINNVFFQYMNLQVHFFNDDTRRVWNLNKFKVDLLIDTMNVKVSDGALGIPKAVTVDDI
MNHAEANQKLVKGFYDGYMSASCVTCEEYQERLTMGRIPCSICQTEFDYTSSEQEMKPLL
AFCITSDCPFTSHLSCLHRYFLDDEQTVIGRRNLIPKSGKCPDCSVVLPWVSIVRNSITV
KKLYGSD
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaactgtgggatctcaacctaagacaagaacccagttctattgttgttatcta
ttgcagtccataagtaagagacaatcgttctatatcggttccacgccggatccaccaaag
agattaagacaacataatgggattcttagtaaaggcggggcctatagaacaagaagggaa
ggttcaagaccatgggagatgatatgtattgtatatggattccctaataaaataagtgcg
ttgcaatttgaacatgcctggcaacatgggtatcaaacacattacatcaaggcagctgac
aggatcgtccaaaataaaaatggaggaagaactatacatcataagctagtattaataagg
caactgatcaataatgtgttctttcaatatatgaatttgcaggttcattttttcaatgat
gatactaggagggtttggaatttaaataagtttaaagttgatcttctaatagatacgatg
aatgtcaaggtttcggatggtgccctaggaataccgaaggctgtaacggttgatgatatt
atgaatcatgcagaagctaatcaaaaactggtcaaagggttttatgatggctatatgtct
gcatcatgcgtaacatgcgaagaatatcaagagaggctaactatgggacgaataccgtgt
agtatttgtcagacagaatttgactatacatcgagcgaacaagaaatgaagcccctacta
gcattttgcattactagtgactgtccatttacaagtcatctcagttgtcttcatcgatat
tttttagatgatgaacaaaccgttataggtaggcgaaatctgataccaaaatcaggtaaa
tgtccagattgctcagtagtgctcccttgggtgtcaattgttaggaattctataacagtt
aagaagctttatggatctgattaa
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