Naumovozyma castellii: NCAS_0H01670
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Entry
NCAS_0H01670 CDS
T02233
Symbol
NCAS0H01670
Name
(RefSeq) exosome non-catalytic core subunit RRP4
KO
K03679
exosome complex component RRP4
Organism
ncs
Naumovozyma castellii
Pathway
ncs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCAS_0H01670 (NCAS0H01670)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncs03019
]
NCAS_0H01670 (NCAS0H01670)
Messenger RNA biogenesis [BR:
ncs03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
NCAS_0H01670 (NCAS0H01670)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
NCAS_0H01670 (NCAS0H01670)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
96905155
NCBI-ProteinID:
XP_003677825
UniProt:
G0VIZ9
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All DBs
Position
8:319192..320304
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AA seq
370 aa
AA seq
DB search
MSEVISVVKRQGGFQYSVDESNIQSDDDEDIYMSDDGNARTGKMDTGNNDTESGSQIVTP
GELVTDDPIWMRGHGTYFLDNMTYSSVAGTVSRVNRLLSVIPLKSRYSPETGDHIVGRIA
EVGNKRWRVDIGGKQHAVLMLGSVNLPGGILRRKSESDELQMRSFLKEGDLLNAEVQSLF
QDGSASLHTRSLKYGKLRNGMFCQVPSSLIVRAKNHTHNLPGNITVVLGVNGYIWLRKTS
QMDITRDAPPGGSTGGGSSTSSGQNSTNGPTGAVSLNPSITRLEEESSWQIYSDENDPSI
TANIRKTISRYANVIKALAYCEIGITQERIISAYEVSMAYPNVGSLIDRETMESIGNDVL
NGEKMRGNAM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagtgataagtgtggtgaaaagacaaggtgggtttcaatactccgtggatgaa
tccaatatacaaagcgatgatgatgaagatatttacatgtccgatgatggaaacgcaaga
acgggtaagatggatactgggaacaatgatactgaatccggatctcaaattgtgacaccg
ggggaactagttactgatgatcctatttggatgagaggtcatggtacttattttctagac
aatatgacatattcttctgtcgcggggacagtctccagagttaatagattattatctgtt
atcccattgaagagtcgttattcaccagaaaccggtgaccatatagttggaaggatagct
gaagttgggaacaaaagatggagagtggatattggtgggaagcaacatgctgtgctgatg
ttaggttcagtgaatttaccaggtgggatcctaagaagaaaatctgaaagtgatgaatta
caaatgagaagtttcttaaaggaaggggatctattaaatgcagaagtccaatctcttttc
caagatgggagtgcgtcattacatacaagatctctaaaatatggtaaattaaggaacggt
atgttctgccaagtgccaagttcgttaatcgttagagcaaaaaatcatacacataactta
cctggtaatattacggttgtgttgggtgtcaatggatacatatggttacgaaagacttcc
caaatggatataacgagagatgcaccaccaggtggaagcacaggagggggttcatcaaca
tcttctggacaaaattcaaccaatggccctactggtgctgtttctctaaatccttccatt
acaaggctggaagaagagtcatcatggcaaatttattcagatgaaaatgatccatctatt
acagccaatataaggaaaacgatttcacgttatgccaatgtcattaaagcactagcctat
tgtgaaatagggattactcaagagcgtataatttccgcatatgaagttagtatggcctat
ccaaatgttggttcattaatagatagagaaactatggaatccatcgggaatgatgttcta
aatggtgaaaagatgagaggtaatgcaatgtga
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