Naumovozyma castellii: NCAS_0H01720
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Entry
NCAS_0H01720 CDS
T02233
Symbol
NCAS0H01720
Name
(RefSeq) uncharacterized protein
KO
K14327
regulator of nonsense transcripts 2
Organism
ncs
Naumovozyma castellii
Pathway
ncs03013
Nucleocytoplasmic transport
ncs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
NCAS_0H01720 (NCAS0H01720)
03015 mRNA surveillance pathway
NCAS_0H01720 (NCAS0H01720)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncs03019
]
NCAS_0H01720 (NCAS0H01720)
Messenger RNA biogenesis [BR:
ncs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
NCAS_0H01720 (NCAS0H01720)
mRNA cycle factors
P-body specific factors
NCAS_0H01720 (NCAS0H01720)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
96905160
NCBI-ProteinID:
XP_003677830
UniProt:
G0VJ04
LinkDB
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Position
8:complement(join(326096..329251,329324..329329))
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AA seq
1053 aa
AA seq
DB search
MENERRIQLHTLNTRAWAGEEVFPLKSQKLDSSIKRNTGFIRKLKKGFLKESTASLLKDL
SELSLEKYMSEVIATVNEALTNVSNKNDEVVAAVEVVCALHQRFNERFTPQLFQLFLNNF
ANPEKEKETEKEELLRINRLKGKLYVLTELYLVGVFTSLEHIESKEALPFYLQKKIHRRE
PIIFSVLKEILNYRFKLGYTTTLATSFVKRYPFLFDTEDKALDECIYDESLKDSLKTLFK
VFSDAVFSKVVDINKRMKKLSKEHQKCQIRTGKVRDEYIDERDILEPIFERFDAATKVFA
EYFKLPLPDLGVEQDTGTEETSGSMITNQLPPPSERLWENDETKRFYENLPDIQEVVETA
NIESVNASTDQINSFFTEMETANSKADIDKLCLTYWSSGIDNKATRNRLLKFFIETKEWS
KLNIYARFLATNHKYMPEITDEFVQYLDNGFRSQLHSNRLNLKNIMFYSEMMKFMLIPLF
MVFHKIRSLIMNMQVPNNIEILTVFLEYSGKFLINNPETKPQMEKMVQLIRDKTKDRQLN
INTKNALENIITLLYPPSVKSLNLKKKQYTPEQQFYRILIRSELSNIDSKHTIKLLRKAH
WDDPAVYKTLLSLFTKPWKINYQNVPTLVKILNGLYMYHRNFIIKCIDQVLEDIERGLEI
NEYSENRHRIAQVRYLVEIYNMEMIKSDVLLEKIFQILKFGHPNNQPNPFNLNEMDLPDN
YFRIQLITTILLNVRRFPATLNKNLNFLLAFFDYYIFTKDQPLPKETQFKVVDTFERLKS
KSGFERSADLYESAMKLEKLVKANGKPIINKNLDTTKKVGESAMAERLLPTTDNIEDDDD
DDDDENDDGTQLVDEDSEEENSFEDSNSEQSSSESGEDDSDEEESDSENESDSRVDTDEE
NDDFIDIDADRDRERRRMYDEFEKKLQGNEEVKVQDELERQFQQIMQESLEARKSEKVST
GKIPMIGNIPKAPLEKTVSSSSVDSRMSTESTSSGKPNKVAFTFLTKAGKKTQSRVLELP
SNVKFVSNVLEEEEKLKNEREKIKKIVLQRSFD
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgaaagaagaatacaattacatacgctgaatacaagagcatgggctggcgaa
gaagtgttcccattaaaaagccagaaactagactccagtattaagagaaatacaggtttt
attaggaagttaaagaaaggttttctcaaggaatctaccgcatcgttgttgaaagatcta
tccgaactttcattggaaaagtacatgtcagaagttattgcaacagttaacgaagcttta
acaaatgtctcaaacaaaaatgatgaagtcgttgctgccgtggaagtagtatgcgcacta
catcaacgatttaacgagaggtttacaccgcaattgttccaattgttcttgaataacttt
gcaaatcctgaaaaggagaaggaaacggagaaagaagaactgttaaggataaatagatta
aaagggaaattgtatgttttaacagaactttatctagtcggtgtcttcacgtcgctggaa
catattgagtcaaaagaagcattgccattttatctccagaaaaaaattcatagaagggaa
cccataatctttagtgtattaaaggagattttaaattacaggttcaaactaggttacact
actacgttggctacatcatttgtcaaaagatacccatttctttttgatactgaagacaaa
gcattagatgaatgcatatatgatgaatcattaaaggattctttaaaaacccttttcaag
gtattcagtgatgcagtcttttccaaagtagttgatataaataaaagaatgaaaaaactg
agtaaagaacatcagaaatgtcagatacgtaccggaaaagttagagatgaatatattgat
gaaagggatatattggaaccaatcttcgaaagatttgatgcagctacaaaggtgtttgca
gaatatttcaagcttcctttacctgatttaggtgtagaacaagatactgggacagaggag
acttctggttctatgattacgaatcaattgcccccaccgagcgagagattatgggaaaat
gatgaaacgaagagattttatgagaatttgccagatattcaagaagtagtagaaacggct
aatattgaatcagtcaatgcatcgacggatcaaatcaattctttctttacagaaatggag
acagcaaattctaaagcggatattgataagctttgcttaacttattggtctagtggtatt
gacaataaagccacccgtaatagattattgaagtttttcattgaaacaaaagaatggagc
aagttgaacatatatgctcgtttccttgccactaatcataagtatatgccagaaattact
gacgagtttgtccaatacctggataatgggtttagaagtcaattacattcaaataggtta
aatttgaaaaatataatgttctacagtgaaatgatgaagtttatgttgattccattattt
atggtttttcacaagatcaggtcattgattatgaacatgcaagttccaaataatattgag
attttgactgtgtttttggaatattctggtaaatttttgattaacaacccagaaaccaaa
ccacaaatggagaaaatggtacaattaattagagacaaaacgaaggatagacaactgaat
ataaatactaaaaatgccttggaaaatataataaccctgctctatccaccatctgtcaag
tccttaaaccttaagaagaaacagtacacaccggagcaacaattttatcgtatcttaatc
agaagtgaactatccaacattgacagtaagcacaccatcaaactgttaagaaaggcgcat
tgggatgatcctgctgtttataaaacgctactttccttgtttaccaagccatggaagatt
aattatcagaatgttcccacattagtgaagattctcaatgggttatacatgtaccacaga
aatttcattatcaaatgcatagaccaagttttagaagatattgaaagaggattagagatc
aatgaatatagtgagaatagacatagaattgctcaagtgagatatctcgttgaaatttat
aatatggaaatgattaaatccgatgttcttttggagaaaatatttcagattcttaaattt
ggacatccaaataatcaaccaaaccccttcaatttgaatgaaatggatctgcctgataat
tacttcagaattcaattgataacgacaattctattgaatgtaagaagattcccagcgaca
ttaaacaagaatttaaatttcttgttggcatttttcgactattacatctttaccaaggat
caaccgttaccaaaggagacacaattcaaagttgttgacacttttgagagactcaagagt
aagtcgggttttgaaagatccgctgatctatatgaaagtgcaatgaaattggaaaaattg
gttaaagctaatggcaaacctattattaataaaaatttggacacaactaaaaaagtgggc
gaatctgcaatggcagaacgtttgttgcccactactgataatattgaagatgatgatgat
gatgatgatgatgagaatgatgatggtactcaacttgtagacgaggactcggaagaggaa
aattcatttgaagattccaacagtgagcaatcatccagtgaaagtggtgaagatgactct
gatgaggaagaatctgatagtgaaaacgaaagtgacagtcgagttgatactgatgaagag
aatgatgattttatagatattgatgctgatagagatagagaaagaagaaggatgtatgat
gaattcgagaagaagttacaagggaatgaagaagtgaaagttcaggatgaattggaaaga
caattccagcagatcatgcaagaatctttagaggccaggaaatctgagaaggtgagtaca
ggtaaaatcccgatgattgggaacattccaaaggctccacttgagaagactgtaagttct
agctcggttgattcgaggatgtctactgaatctacttcttcaggaaagccaaataaagtt
gcgtttacatttttaacgaaagctgggaagaaaacacaatcaagagtattagaattacca
tctaatgtaaaatttgtttcaaatgtgttggaggaggaggaaaaactaaagaatgaacgt
gagaagatcaaaaagattgttttacaacgatcttttgattaa
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