Naumovozyma castellii: NCAS_0H02610
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Entry
NCAS_0H02610 CDS
T02233
Symbol
NCAS0H02610
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
ncs
Naumovozyma castellii
Pathway
ncs03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
NCAS_0H02610 (NCAS0H02610)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncs03021
]
NCAS_0H02610 (NCAS0H02610)
03019 Messenger RNA biogenesis [BR:
ncs03019
]
NCAS_0H02610 (NCAS0H02610)
Transcription machinery [BR:
ncs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
NCAS_0H02610 (NCAS0H02610)
RNA polymerase I system
NCAS_0H02610 (NCAS0H02610)
Messenger RNA biogenesis [BR:
ncs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
NCAS_0H02610 (NCAS0H02610)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5_N
KOW5_SPT5
KOW
Spt5-NGN
KOW2_Spt5
KOW4_SPT5
KOW1_SPT5
KOWx_SPT5
SH3_KIN17_C
KOW7_SPT5
CTD
DUF3912
KOW6_SPT5
Motif
Other DBs
NCBI-GeneID:
96905248
NCBI-ProteinID:
XP_003677918
UniProt:
G0VJ92
LinkDB
All DBs
Position
8:complement(516477..519374)
Genome browser
AA seq
965 aa
AA seq
DB search
MSEESGSTPVTTQETTPAADTPSESPAVSNATPDTTTDVVATTSVKTEDDSNKRPREDED
SNGENKDTKEEDKDTNNDDDDEDDEDDDEDDDDEERPTKKHRQERNRFLDIEAEVSDDED
EDEDEEESELVREGFITHEDDEQGSAAGRSDKLHRQLDQDLNKTSEEDAQRLAKELRERY
GRSSSKQYRAAAQSGYVPQRFLLPSVDTATIWGVRCRPGAEKALVRKLLKKKFNLDRAMG
KKKLKILSIFQRDNYTGRIYIEAPKQSVIEKFCNGVPDIYINQKLLIPVQELPLLLKPNK
SDDVSLAEGNYVRIKRGIYKGDLAMVDQISENNLEVMLKMIPRLDYGKFDEIDPVTNQRK
PRRATYAHRPPPQLFNPTMALRLDQANLYKRDDHHFTYKNDDYIDGYLYKSFRIQYVETK
NIQPTVEELARFGSKDGAVDLTSISQAIKKAQAAQVTFQPGDRVEILNGEQRGSKGIIVS
TTTDIATVRLPNYQYKPLEFPILSLRKIFEPGDHVTVISGEHEGDAGLVLMVKQGQVTFM
SNQTREEVTITANNLSKSIDSTPTSSEYALHDIVELSAKNVACIIQAGHDIFKVIDETGK
VSTITKGSILNKVDTARARVTTVDGNGNEVKIGDSVVEKLGARREGQVLYIQTQQIFIVS
KKIIENAGVFVVNPANVEAVSSKENILNSKLDLNKMNPDIVSTMGPPSSSQPMIKPQQSR
MGREVALGKTVRIRSAGYKGQLGIVKDVNGEKATVELHSKNKHITVDKHKLAYYNREGGE
GITYDELVNRRGRVPQARMGPSYVSAPRGMGNPTQVAGVPDGGRTPGWNSFDGGKTPAVN
SHGGAGAGTASAWGCASTWAGQGTGATSTWGGQGGASTWGGQGATSTWGGASTWGNKSSW
GGASTWANSGESNNNGAGSTWANTGDSNNNNGGTSTWGGNKEGGASTWGGNKEGGRSTWN
DQGRN
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagagtctggatctactcctgtgacaacgcaggaaactactcccgctgcggat
actccttctgagtctcccgctgttagtaatgctacaccagatacaacaactgatgttgtt
gccactacgagtgttaaaacggaagatgattctaataagagaccaagagaagatgaagat
agtaacggtgagaacaaggataccaaggaagaggataaggacaccaacaatgacgatgat
gatgaagacgacgaagatgatgacgaagatgatgacgatgaagaaagaccaacaaaaaag
catcgtcaggagagaaaccgattcttggatattgaagctgaagtcagtgatgatgaagat
gaagatgaagatgaggaagaatcagaattggttcgtgaaggtttcattacacatgaagat
gatgagcagggatctgctgctggcagaagtgacaaattgcatagacaattagaccaagac
ttgaataagacatccgaagaagatgcacaaagactggctaaagaattaagagaacgttac
gggagaagtagctccaaacaatatcgagccgctgctcagagtgggtacgttcctcaaaga
ttcttattaccaagtgttgatacagctaccatttggggtgttcgttgtaggcctggtgct
gagaaggcattggttcgtaaattactgaagaagaaatttaatttggatagagccatgggg
aaaaagaaattaaagattttatccatttttcaaagagataattatacagggagaatttac
atagaagctccaaagcaatctgttattgagaaattctgtaatggtgtccctgatatttat
attaatcaaaaattattaattcctgtgcaagaattacctttattattgaagccaaataag
tcagatgatgtctctcttgcagaaggtaattacgttcgtatcaagcgtggtatttacaaa
ggtgatttagcaatggttgaccaaattagtgaaaataatctagaagtcatgttgaagatg
attcctcgtctggactatggtaaatttgatgaaattgacccagtaacaaaccaacgtaaa
ccaagaagggccacatatgcgcatagacctccacctcaattattcaatccaacgatggcc
ctaagattagatcaagccaatttatacaaaagagatgatcatcattttacctataagaac
gatgattatattgatggttacctatataaatcatttagaatccagtatgtggaaacgaaa
aacattcaaccaacagtggaagaattggccagatttggttctaaggacggagctgtggat
ttgacatccatatctcaagctatcaaaaaggcacaggctgctcaagtgacgtttcagcca
ggtgatcgtgtagaaatcttaaatggtgagcaacgtggctccaaaggtattattgttagc
acgaccacagacattgccactgttaggttaccaaactatcaatataaaccattggaattt
ccaatattgtccttgagaaagatctttgaaccaggtgaccatgttaccgttattagtggt
gaacatgaaggtgacgcaggtttggttctgatggttaagcaaggtcaagtaacttttatg
tcaaatcaaacaagagaagaagttaccattacggctaataatttatcgaaatctattgat
tctacgcctacctcgagtgaatatgcattgcatgatattgttgaattgagtgccaagaat
gttgcatgtattatacaggcaggtcatgatatcttcaaggtgattgatgaaactggtaag
gtttccaccattacaaagggctccatattgaataaagttgatactgcacgtgcacgtgtt
accacagtagatggtaacggtaatgaggtgaaaattggtgattctgttgttgaaaaatta
ggtgcacgtagggaaggtcaagtgctgtacattcaaacacaacaaatattcattgtttca
aagaaaattatcgaaaatgctggtgtctttgtggtgaaccctgccaatgttgaagcagtt
tcatcaaaggaaaatatattgaatagcaaactagatttgaataagatgaacccagatatt
gtatcaactatgggtccaccatcttcatcgcaacccatgattaaaccacaacaaagtcgt
atgggacgtgaagttgctctgggtaagactgtaagaattcgttctgcaggttataagggt
caactaggtattgttaaagatgtcaatggtgaaaaagccacagttgaattacattcaaag
aataaacatatcacggtggataaacataaattggcctactataatcgtgaaggtggtgaa
ggtataacatacgatgaattagttaatagacgtggtagagtaccacaggcaaggatgggt
ccaagttatgttagtgcaccaagaggtatgggtaatccaactcaagttgctggtgtccct
gatggtggtagaacacctggctggaattcgtttgatggtggtaagacacctgctgttaat
tctcatggtggtgctggtgctggtactgcatctgcttgggggtgtgcatccacatgggct
ggccaaggaacaggtgcaacatctacctggggtggtcaaggtggtgcttcgacgtggggt
ggccaaggtgctacatctacttggggtggtgcatctacttggggtaataaatcaagttgg
ggtggagcttcaacatgggccaacagtggtgaatctaataacaacggtgcaggctcgaca
tgggctaatactggagattctaataataacaatggtggtacctcgacgtggggaggaaat
aaagaaggaggcgcctcaacatgggggggcaacaaagaaggtggaagatccacctggaat
gatcaaggtaggaattga
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integrated database retrieval system
