Naumovozyma castellii: NCAS_0H03450
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Entry
NCAS_0H03450 CDS
T02233
Symbol
NCAS0H03450
Name
(RefSeq) WD-repeat containing protein SWD2
KO
K14962
COMPASS component SWD2
Organism
ncs
Naumovozyma castellii
Pathway
ncs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NCAS_0H03450 (NCAS0H03450)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncs03019
]
NCAS_0H03450 (NCAS0H03450)
03036 Chromosome and associated proteins [BR:
ncs03036
]
NCAS_0H03450 (NCAS0H03450)
Messenger RNA biogenesis [BR:
ncs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
NCAS_0H03450 (NCAS0H03450)
Chromosome and associated proteins [BR:
ncs03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
NCAS_0H03450 (NCAS0H03450)
COMPASS/SET1 complex (yeast)
NCAS_0H03450 (NCAS0H03450)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_RIG_2nd
Lactonase
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
96905332
NCBI-ProteinID:
XP_003678002
UniProt:
G0VJH6
LinkDB
All DBs
Position
8:complement(653985..654968)
Genome browser
AA seq
327 aa
AA seq
DB search
MPLSISKENLQKFKAVKSFKVQDKELSPITSISFDDYGQYLLTASASDNMHLYDAVGCRF
LNTIGSKKYGCHSAKFTHAQNECIYSSTMKSFDIRHLNLETNQYLRYFIGHDALVSDIEM
SPLNDTFLSASYDESVRLWDLRVSKAQAIVPSVVPHCIAYDPSGLVFALGNPENFEIGLY
NVRQLKNGPFLTMKVDPKFSQWNKLEFSNDGKYLLLASSVGKHLILDAFDGSQLFELTGT
RAFPLREFMDSGSACFTPDGQFVLGTDYEGSVAIWSHSDSISNRTLKPQASIPAAPNSCP
RTIAFNPKYSMFVTADENVDFYVFDEN
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcctctctccatatccaaggaaaatctacaaaaatttaaggcagttaaatcatttaaa
gtacaggataaggaattgagcccaatcacatccataagcttcgatgattatggtcaatat
cttctcacagcatctgccagtgataacatgcacttatatgatgcagtgggatgtaggttt
ctgaatacgatagggtccaagaagtatggttgccattctgccaaatttacacatgctcaa
aatgaatgtatttactcatctacaatgaaaagtttcgatataagacatttgaacctagag
acaaatcaatatttaaggtattttataggacatgatgctcttgtaagtgatattgaaatg
tcacctttaaatgacacctttttatcagcgtcctacgatgaatctgttagactttgggat
ttaagagtttcaaaagcacaggctattgttccaagtgtggtaccacattgcattgcatat
gatcccagtggactagtgtttgcattaggaaatccagaaaatttcgaaattggtctgtat
aatgttagacagttgaaaaacggtccctttttaactatgaaagtagatccaaaatttagt
caatggaataaactagaattttccaatgatggaaaatatttattactggcttcatctgtg
gggaagcatttgatattagatgcctttgatggatctcaattatttgaactaacggggaca
agagcattccctctaagagaatttatggactcaggctctgcatgttttactccagatggt
caatttgttcttggaactgattatgaaggtagtgtagcaatatggtcacatagtgattcc
attagtaatagaactttgaaacctcaagcttctatcccggcagcaccaaactcatgtccc
aggacaattgcatttaatccaaaatattccatgttcgtcaccgctgatgaaaatgtagat
ttttatgtatttgatgaaaattaa
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integrated database retrieval system
