Naumovozyma castellii: NCAS_0H03580
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Entry
NCAS_0H03580 CDS
T02233
Symbol
NCAS0H03580
Name
(RefSeq) uncharacterized protein
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
ncs
Naumovozyma castellii
Pathway
ncs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCAS_0H03580 (NCAS0H03580)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncs03019
]
NCAS_0H03580 (NCAS0H03580)
Messenger RNA biogenesis [BR:
ncs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NCAS_0H03580 (NCAS0H03580)
mRNA degradation factors
3'-5' decay
Pan complex
NCAS_0H03580 (NCAS0H03580)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
HIGH_NTase1
Motif
Other DBs
NCBI-GeneID:
96905344
NCBI-ProteinID:
XP_003678014
UniProt:
G0VJI8
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All DBs
Position
8:678842..680779
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AA seq
645 aa
AA seq
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MDKINAEWAKDIPCRNVTIYGYCKKIKDGCPFKHSETDEPAAEIQEPVPVQQSPVAPVPS
FSRKFNPKSSASFTPMSSKTPELAAVSSFERSSNPSSPAPPASIPKPMNSPLASQSSNAS
FPPQPFYSYPASSSNGTLLNNTILPDGISLHDPAFPLTQIDKTMLANDPNLPSANVPLQF
SSSPASNIHQQMLNENNINNNNSRYPSIYPPPHSILQYHLYAPDPPPQLRLPLKPNERTP
ETLFIPNDLREQLVKKNLASLQIFPSGGAIPDIVQDYFGLVPLDFHQKEVTKDRYQGHKN
SLYKVFSNLDGKVYILRRIHDVQIMDPQQIAKPFQKWNNLECNQIVKLRDLFLTTKFGDS
SLCLVYDFYPQANSLYEHHFTNFPLVPITQDYLWTYLVQLTNAINVVHSKGFYIGLIDWD
KIIVTGDPGRIKLSGCGAIDVLGANEELDLHSKQQMDFENLGQLLFKLASKIGNNANAKI
DELSVDDQFKTVLQYLLNDTNDRKTINELSQLFIDKILSNVESSQGYAEYTEGILSRELE
NGRLFRLICKLNFIFGKIESRVDINWSESGEKFPIILFYDFVFHQVDETGKSVMDLTHVL
RCLNKLDAGAPEKLILATPDEMNCIIISYKELKDLIDTTFRSMTQ
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggacaagattaatgccgaatgggcaaaagatatcccttgcagaaatgtcaccatttat
ggatactgcaagaagattaaagatggttgccccttcaaacacagtgaaacagatgagcct
gctgcagaaatacaggagcctgtaccagtacagcaatctccagtggccccggtcccatct
tttagtcgtaagtttaatcctaagagttctgccagtttcactcctatgtcttctaagact
cccgaattggcagctgtgtcatcttttgaacgttcatcaaatccatcttcaccagcacca
ccggcaagcatacccaaaccaatgaactccccattggcttcccagagttctaatgcttca
ttcccaccccaacctttttattcctatcctgcatcctcctcgaatggcactttattaaat
aatacaatcttaccggatggaatttctcttcatgatccagcatttcctttgacacagata
gataagactatgttagcaaacgacccaaaccttccgtctgcaaatgtaccgttacaattt
tcatcttcacctgcttcaaatattcatcagcagatgcttaacgaaaataacattaataac
aacaatagtagatacccctcgatatacccaccaccgcatagtatcttacaatatcatttg
tatgcccctgatccacctcctcaattaagattaccattgaaaccaaatgaaagaactcct
gaaacattatttattccaaatgatttaagagaacaattagtcaagaaaaatcttgcatca
ttacaaatctttccttcaggtggtgccattcctgatattgtacaagattattttggttta
gtaccattggatttccatcaaaaggaagttaccaaagatcgttatcaaggccataagaat
tctctttataaagtattctcaaacttagatggtaaggtttatatcttacgtagaatccat
gacgttcaaataatggatcctcaacaaattgctaaaccgttccaaaaatggaataatttg
gagtgtaatcaaattgtcaaattaagagacttatttttaactactaaatttggagattct
tccttatgtttagtttatgatttctacccacaagcgaactctctatatgaacatcatttt
actaatttccctctagtaccaataactcaggattacttatggacttaccttgttcaattg
accaacgcaataaatgttgtacattcgaagggtttctatattggattaattgactgggat
aagattattgtcacgggagatccaggtagaattaagctatcaggttgtggtgcaattgat
gtattaggcgccaatgaagaattggatttacattccaaacagcaaatggattttgaaaac
ttgggacaattattgttcaaattggcttccaaaataggaaataatgctaacgctaagatt
gatgaattatccgttgatgatcaatttaaaactgtgctacaatatttattaaatgataca
aatgataggaaaaccattaatgaattatctcagttatttattgataagatattatccaat
gtagaatcatctcaaggttatgctgaatataccgaaggcattctttcaagagaactagaa
aatggaagattatttagattgatttgcaaattgaattttattttcggcaagattgaatcg
agagtggatatcaattggtccgaatcaggtgaaaaatttccaattattctgttctatgat
tttgttttccatcaagttgatgaaacggggaagtctgtcatggatttaactcatgttcta
agatgtttgaataagttggacgcaggtgctcctgaaaaattgatattagctacccccgat
gaaatgaattgtattattatcagttacaaagagttgaaggacttgatagatacaactttt
agatcaatgactcaataa
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