Naumovozyma castellii: NCAS_0I01510
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Entry
NCAS_0I01510 CDS
T02233
Symbol
NCAS0I01510
Name
(RefSeq) DNA-dependent ATPase RDH54
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
ncs
Naumovozyma castellii
Pathway
ncs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCAS_0I01510 (NCAS0I01510)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncs03400
]
NCAS_0I01510 (NCAS0I01510)
DNA repair and recombination proteins [BR:
ncs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
NCAS_0I01510 (NCAS0I01510)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
ZGRF1-like_N
AAA_22
DUF4460
Motif
Other DBs
NCBI-GeneID:
96905506
NCBI-ProteinID:
XP_003678161
UniProt:
G0VJY5
LinkDB
All DBs
Position
9:complement(279933..282713)
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AA seq
926 aa
AA seq
DB search
MSLPKYQNKPFKPPRRLISAQANSNSPLNSTKRLPSDNFANETTSKRIKVPPSKEPVTTS
NTGGDNGTKCFTIMYRKPSMKKHKTWDNDGYAQLRTSNNLILFNDAGTKIGNRHLTNDSE
LCDFIFKAGSWEVQVDYELSDPKELQRVRSLLCKNNQATVTPPSSARTNGNAITKSVTQN
KIPVSQLFNSQTVTKFKTIMKKSDAHTPLSSSKQNEITSKKKKYQPVFDVSKIENPIIMN
KWRDADVDVIVDPLLGKLLRPHQREGVKFMYDCVMGLATNHQETDEDNTGKSLILEKDSD
IGGCLLADEMGLGKTLMTITLIWTLLKQSPSLKNIACSQSGVPLHGLCRKILVVCPVTLI
GNWKREFAKWLNLNRIGILTLSSRNTPEMDKTAVKNFLRVQRTFQVLVIGYEKLLSVSEE
LHGSRDLIDLLICDEGHRLKNGSSKVLNVLKNLEIKRKILLSGTPIQNDLNEFYTIIDFL
NPGILGSYPYFKKRFIAPITRGRDTENRHNEDIIELGEGRSKEMIDITRKFTLRRTNAIL
SKYLPPKTDIILFCKPTQSQLLAFNDILSRSRIDFANLSFNSSLGLITLFKKICNSPTLI
GDDSYYQSKIRPDGVIQERYDRSLNSGKLKILMTLLEKIKGNTNNEKVVIVSNYTQTLDI
IQNLMNSAQMVSCRLDGSTPAKQRDSIVNTFNRNPSIFAFLLSAKSGGVGLNLIGASRLI
LFDNDWNPSIDLQAMSRIHRDGQKKHCYIYRLITTGCIDEKILQRQLMKHSLSKKFLDSS
YTTGKTGSNDDLFTKEDLKDLFTIMETTKSNTHDLICDCEGTGKSVSLNEIAHPKKKNLE
KRRNSWTNALQLSQVMEDDEMKNMQQKTNLMKECFVGYKHIDPLKTNELADNVTSNTLKT
MKEWITFAFINDEKVDSTKEDIIILD
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgtcactacccaaataccaaaataagcccttcaaaccacctcggagactaatatcggct
caagcaaactccaactcaccattaaatagtaccaaacgactccccagtgacaactttgcc
aatgaaaccacatccaagagaataaaagtaccgccatccaaggaaccggtaacaacaagt
aataccggaggcgataatggcaccaagtgttttacaataatgtatcggaaaccgtcaatg
aaaaaacacaagacatgggataatgacggatatgcacagcttaggacatccaacaacctt
atcctctttaatgatgctgggactaagattggtaatcgtcaccttacgaatgattctgag
ttatgtgattttatttttaaagctggatcatgggaagttcaagtggattatgaattatcg
gaccctaaagagttacaaagggtccgttctttattatgcaaaaataatcaagcaacagtt
actcccccatcttctgctaggactaacggtaatgctatcactaagtcagttacacaaaat
aagattccagtttctcagttatttaattcgcaaactgtaacaaaatttaaaacaataatg
aagaaatctgatgctcataccccactatcctcctctaaacaaaatgaaattacttctaag
aaaaagaaatatcaaccagtgtttgatgtatcaaagatagaaaaccccatcattatgaac
aagtggagggatgccgacgttgatgtcatagtagatccattattggggaaattattgaga
ccacatcaaagagagggtgtaaagttcatgtatgattgcgtaatgggtctagcgaccaat
catcaagaaacagatgaagataatacagggaaatctttgatcttggagaaggattctgat
attggtggatgtctattagcagatgaaatgggattgggcaaaacattgatgaccataaca
ttaatatggacacttttgaaacaatcaccaagtttgaaaaacattgcctgttcacaatct
ggcgtaccattacatggactatgtaggaaaatattggtagtctgtccagtgacgcttatt
ggtaattggaaaagagagtttgcaaaatggttgaatttaaatagaattggaatactcact
ttaagctcccgaaatactccggaaatggataaaaccgccgtaaagaatttcctccgagtt
caaaggacattccaggttctagtgataggttatgaaaaattattaagtgtttctgaagaa
ctacacggctcaagagacttgattgatttgcttatctgtgatgaagggcataggttgaaa
aacgggtcttccaaggtattaaatgtattgaaaaatcttgaaattaaaaggaaaattctt
ctttcaggtactcctattcaaaatgatctcaatgaattctatactataattgatttcctt
aaccctggaattcttggatcatatccttatttcaagaaaaggttcatagcgcctattacg
agaggaagggacacagaaaatagacacaatgaagatattatcgaacttggtgagggtaga
tcaaaggaaatgattgatataacaagaaaatttaccttaagaagaacaaatgctattctc
agtaaatatttgccccccaaaacggatatcattctattttgcaagccgacacaatcacaa
cttttggcctttaatgatatcctgagtagatcaaggatagattttgccaatctatctttt
aattcatcattggggctcattacccttttcaagaaaatttgcaactccccaacattaatt
ggtgatgatagttactaccagtcaaagattagacctgatggtgtaatccaggaaaggtat
gatcgttctttaaattctggaaaattaaaaatcctaatgacacttttagaaaaaattaaa
ggtaataccaacaatgagaaagttgtcatcgtttccaactatacacaaacccttgatata
atccaaaatctaatgaattcagcacaaatggtatcttgccgattagatggttcaacgcca
gcgaaacaaagagattccatagtgaatacatttaatagaaatccctctatttttgcgttc
ttattaagtgcgaaatcaggtggggtaggtttgaatttaataggtgcgtctcgtctaatt
ctttttgataatgactggaacccatccattgacttgcaagctatgtctagaatccataga
gatggacagaaaaagcattgttatatatatagattaataacaacaggatgcatagatgaa
aagattctgcagcgacaattaatgaaacatagtttgagcaaaaaatttctagattcatca
tacacgaccggaaagacgggatctaatgatgacttatttactaaagaagatttgaaagat
ttattcaccattatggaaaccactaagagtaatactcatgatttaatttgtgactgtgag
ggtacaggtaaaagcgtgtcacttaatgaaatagctcatccaaagaagaagaatttagag
aaaaggcgtaacagctggaccaatgccttgcaattatcacaggtaatggaggatgatgag
atgaagaatatgcaacagaaaacaaatctaatgaaagaatgtttcgtcggttataaacat
attgaccctctgaaaacaaatgaattggctgacaatgtgacttcgaatacgttaaaaact
atgaaagaatggataacatttgcctttataaatgatgaaaaagttgatagtacaaaggag
gatatcataattctagattaa
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