Naumovozyma castellii: NCAS_0J01390
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Entry
NCAS_0J01390 CDS
T02233
Symbol
NCAS0J01390
Name
(RefSeq) DNA repair protein SMC6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
ncs
Naumovozyma castellii
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncs03400
]
NCAS_0J01390 (NCAS0J01390)
DNA repair and recombination proteins [BR:
ncs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
NCAS_0J01390 (NCAS0J01390)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_21
AAA_29
ABC_tran
AAA_27
Fez1
Motif
Other DBs
NCBI-GeneID:
96905815
NCBI-ProteinID:
XP_003678456
UniProt:
G0VKT0
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All DBs
Position
10:242118..245408
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AA seq
1096 aa
AA seq
DB search
MVTLKRPMEEVDEDLLSLAEEQKNASQELKKKKRRHNLAAMTQFSADGTATTDEEVDEIR
SGYIKKVSLRNFMCHENFELELGPKLNFIVGSNGSGKSAILTAITIALGAKASDTNRGNS
LKELIKEGCYSAKITLVIENGKQGAYDQGTYGKEIIIERTLRRDGSPSFSLKSESGVEIS
NKKRDIQTVVDFFSVPVNNPMCFLSQDAARSFLTASTPQDKYNHFGKGTLLQQIREHLTH
AKEISDTSSENMDLHLQNLAILQNEYLEAKKLLKELNETSDLNEQKRLLQGKSLWIDIEH
NNQSCQELRQNIKTFQTKIAEVMAKIESKKEKIERYTADGASIEKEIDEKVVTVSQKDQE
HQATRDSLREVRKVFETEKSNQREAEQNITQCRNRIKTLDKTIEHLEQDLKKEMGGDKEQ
MREEQISLEHESDQLRKELSDLQISMDEMKNEERDIIRQRQTELQGIERSIQQKKLELNK
IAQGENNLLSNFDRNMDRLLNAIQQNIQKFQTPPLGPLGMYISIKSGFEQWTRPIQRAVS
STLGSFVVSNPRDSKLIRTLARECDVGYNFPIITYKLRAFDFSDGKAHSDFPTVMDALEF
STPEVECLFVDQNKVEKILLIENKDEARSLLRVNPRNVTMALALRDQRSGYQLVGGNRLD
TVKYPDVIRLKVSNNADYLKELLQQDTEEARRIRDRYENKIIEFRRKLNELNKTQSDYKI
KLQQNNRRITELKYNIGKVVDTGVLNSKIAERRNQEQAIAGYQTAIDELEITIEKIIQKT
QPIKQMYDTTKAAYAAAQAELQQLRDDYSSRSARIEKSKDDIEYYENKKNEYNKTIKKFE
LNIATLDEGIRKQVENAVEFCSKDQLESVDLPDSQEEIKHQLEVISRKIQRAEQSLGLPQ
EKVLDLYEKSRTKYKDGQTKFVEVEKALESLKESIKTRELNLGTISKITCFEADMDFRAS
LKVRKFSGNLVFDDSKRTLNMFVLTANDEKPRNVDTLSGGEKSFSQLALLLATWKPMRSR
IIALDEFDVFMDQVNRRIGTTLVVKKLKDLARTQTIIITPQDIGKIADIDSTGVNIHRMR
DPQRQNNSNFYEGGSR
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggtcactttgaaacgtcctatggaagaagtcgacgaagatttattgtctcttgcggag
gagcagaagaatgcaagtcaagagctgaagaagaagaaaagaagacataatctagccgcc
atgactcagttttccgctgatggtacggcaacaacagatgaagaagttgatgaaattagg
tctgggtatattaagaaagtttcattgaggaatttcatgtgccacgaaaactttgagcta
gaattgggtccaaaactaaattttattgtcggtagtaatggatccggtaagagtgccatc
ttgactgcaattactatcgctctcggtgctaaagccagtgacactaatagaggtaactct
ttgaaagaattaattaaggaaggttgttattccgctaagattaccttagtaattgaaaac
gggaaacaaggtgcgtacgatcaaggaacatatggtaaagagattataattgaaagaact
ttgaggagggatgggtcaccttccttcagcttaaaatctgagtcaggcgtagagattagt
aataagaagagagatattcaaactgtggtggactttttctctgtcccagtaaataatccg
atgtgtttcttatcccaagatgctgctagatcatttcttaccgctagtacaccgcaggac
aaatataatcattttgggaagggtactttattacagcagattcgggaacatttaactcat
gccaaagaaatcagtgacacatccagtgaaaatatggatttacacctacagaatctagcc
attttacaaaatgagtatctagaggctaaaaaattgcttaaggagctaaatgaaacaagt
gacttaaatgaacaaaaacgactgttgcaggggaaatctctgtggattgatattgaacat
aataatcaatcgtgtcaggaattaaggcaaaatataaagacattccaaacgaagattgct
gaagttatggcaaagattgaaagtaagaaggaaaaaattgaaaggtatacagccgatggg
gcttccattgaaaaggagattgatgaaaaagtcgttaccgttagccaaaaggatcaagaa
catcaagcgactcgagattcattgagagaagttaggaaagtgttcgaaacagaaaagtca
aatcaacgtgaagctgaacagaatatcactcaatgtagaaatagaatcaagacattagat
aaaacaattgagcatctagaacaagacttaaagaaggaaatgggtggggataaagaacag
atgagagaagaacaaatatcgttagagcatgaaagtgatcaattgagaaaggaactcagc
gatctacagattagtatggatgaaatgaaaaacgaagaaagagatatcatccgtcaacgg
caaacggaattacagggtatagagcgtagtatccaacaaaagaaactagaattgaataaa
atcgcacaaggtgaaaacaatcttttatcaaatttcgatagaaatatggaccgtttgttg
aatgcaatccaacaaaatattcagaaattccaaacccctccactagggccattgggaatg
tacatttctataaaaagtggctttgaacagtggactcgtccaattcaaagggcagtatca
tccaccttaggatcatttgtagtcagcaatcctcgtgattctaaattaatccgaacacta
gcaagagaatgtgatgttggctataatttcccaattattacttataagttaagagcattt
gacttctcggacgggaaagcacactcggatttcccaactgttatggatgcattagaattt
tctacacctgaagttgaatgtttatttgtggaccagaacaaagtagaaaaaatattgctt
atcgaaaacaaggatgaagcaagaagccttttgagagtaaatcccagaaatgtgactatg
gcacttgctttgagagatcagcgtagtggttaccagctggtaggcggtaatagattagat
accgttaaatacccggatgtaatcagattaaaggttagtaataatgctgattatttgaag
gaactattacaacaggataccgaagaagcacgtcgcattagggatcgttatgaaaataag
attattgagtttcgccgaaagttaaatgagttaaacaagactcaaagtgactataaaata
aagctacagcagaataatagacgaattacggaactaaagtataacattgggaaagttgtt
gatacaggggtcttaaactctaagattgctgaacgtagaaaccaagaacaagctattgcc
ggttatcaaactgcgattgatgaacttgaaatcacaattgaaaaaattattcaaaagacg
cagcctattaagcaaatgtatgatacaactaaggctgcatatgccgccgctcaagctgaa
ttacaacaactgagggatgattatagtagccgttctgctagaattgaaaagagtaaggat
gatattgaatattatgaaaataagaaaaacgaatataacaaaaccatcaagaaatttgaa
ctaaatattgcgacgctggatgaaggtattagaaaacaagtagaaaatgcggttgagttt
tgttcaaaagaccaattagagtccgtcgaccttccagatagtcaggaagagattaaacac
caattagaagtcatttcaagaaaaattcaaagagctgagcaaagtctgggactgccgcaa
gaaaaggtcctggatctatatgaaaaaagtaggacaaagtataaggatgggcaaacgaaa
ttcgttgaagttgagaaggctctagaatcattgaaggaatccattaagacacgtgaactg
aacttagggacaatttctaaaattacctgttttgaagcagatatggattttagagcgtct
ttaaaggttagaaaatttagtggtaatctagtttttgatgattcaaaacgtactctaaat
atgtttgtcctaacggcaaacgatgagaaacctagaaacgttgataccctgtcagggggt
gaaaaatcattttctcaattggcacttttgcttgccacttggaaacccatgcgttcgaga
attattgccctggatgaattcgatgtcttcatggaccaagtcaataggagaattggtacg
acgttggtcgttaaaaaattaaaggatctggccagaacacagacaattattatcacacca
caggatataggtaaaattgctgatattgatagtactggtgttaatattcacaggatgaga
gatccacaacgacaaaataattctaatttctatgaaggtggaagtcggtaa
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