Naumovozyma castellii: NCAS_0J01870
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Entry
NCAS_0J01870 CDS
T02233
Symbol
NCAS0J01870
Name
(RefSeq) DNA/RNA helicase SEN1
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
ncs
Naumovozyma castellii
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncs03021
]
NCAS_0J01870 (NCAS0J01870)
Enzymes [BR:
ncs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
NCAS_0J01870 (NCAS0J01870)
5.6.2.5 RNA 5'-3' helicase
NCAS_0J01870 (NCAS0J01870)
Transcription machinery [BR:
ncs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
NCAS_0J01870 (NCAS0J01870)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEN1_N
AAA_11
AAA_12
SEN1_barrel
AAA_19
UvrD-helicase
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
96905863
NCBI-ProteinID:
XP_003678504
UniProt:
G0VKX8
LinkDB
All DBs
Position
10:352527..359471
Genome browser
AA seq
2314 aa
AA seq
DB search
MDPNPALSVIYERAKSYLPIIEKVYAGTNTTIPEANLLGDLLQLLAELPPNFHMFCDPIL
EPISIFCLTIFSFNEQETVQWLKNKFNPILSQCDKCVLNFARGKCKMLQHFAVQRHVPHE
HVSKFHDIVCLWRIEALLPTLRKISTNDNTTVSITPEIDMAMFECLANPHMMRLNKGFKS
LFDIIFKFFYSSKRPLLDVDNQSSLHTFLAGIIYCWCEGTKEQMNWSKAYLTLKHRKMET
IPLSEFTADLLEEVNIHVLFLQNPNNWTNVIVAQFWSRLIPIFGLFDKDVFMEYFLVPKN
IESLKKSFGFPIESIFKLWYNHLGRAYTDKPLDFLLRALNMFVEKFGFEFWSTIEPYTFH
SILDIIFDRDTFAIKLIRIQSNEIPENDIETLFSLTGSVTDLLSWTLPFYHALTPSKRIQ
MVKKVSMAFLRIISTQASLKSIPRACLMNSSTALLRAVLVIKDEERATLYVKDDFETILL
TKTDSRALLNDPVIQDIFIYSAAKPNEFYPGLGDSAMSVSISTMMVLAECVNFDILLLCE
RTFKLYSGKNIGELPFTQTLLDNLTKKVDLRSFHDGPSLAKQLLVALKNINGLLVIPSKS
PIVQKHNVYIENFLAQATNLIEKFTDILPTQLEKILADSNASQGFWACIFSSNTKLYQAA
TNILYETFDVEGRLEGIQAILSNNLTYHIKSVNIVLDQLIKCEFYEPCPRAIRVLMDIIS
AFADPINGIFSNYNTLKNDTTDEEMTKFWQLSWQFLDTIYRCTLKWASKYEYSELENFTK
DTLELSRSLVDSYREFSDVLTNNKRDLFQSVLNTFKNMLYWLRLSDDSLLESCVRLIIKA
SEIAHEKKIRFEDTLVESIAKYGSKSKKFSNKLSDAQSREILNMAKSFNSDITNKIIAEA
EAYHEGKRLGHPVITIPSSPSPSPTPTPTQARVESKADFLQRKAMSSSILGKPKASQSKI
TSFGTLQRPSMSNLHHQKPTKPVSQMEVARRQLLKNRIVHPPSESVFNTKPTRRVKHEES
SSDESGGEDIESARELFAISKEKKGIQTLDINGKAIKKDSKADIAKREEENMRKRLNVDL
GPLYDTILQWDYTRRHDYPDAEGIEHYADVKDQFDSAAEYQKIMRPLLLLESWQGLCSAR
DRQDSSPFSIIVGNRTAVSEFYEVYASMSKNVLQDSGISDSDLIVLAYFPNYKRGDRLTT
EDFKRAENTCLAKVRSFKNVKGGNVDITLRIHRNQQFSKFLTLRSEIHAVKVMQMTTIER
EYQTLEGLDYYDLVNQIIKAKPSPQMTVPPQEIELVKQNYNLNTSQADAIVNTVAKDGFS
LIQGPPGTGKTKTILGIIGYFLSTRKMLPSNAIKTPTNSSTSSMTIDQMLKKQKILICAP
SNAAVDEICIRLKDGIFDRNGKLFRPNLVRVGRSDVVNVQIKDLTLEELVDKRLAQKNYE
FSNNPELERNFSAAVSKRRTLRAQLDAEEGTPTSKLPTNDIAKIQLEIRELSKQINELGR
QRDEMRERNSVNYRNRDLDRRNAQAQILACSDIICSTLSGSAHDVLAGLGIKFDTVIIDE
ACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEKNTTPYLL
DVQYRMHPEISKFPSAEFYNGRLKDGPNMEEVNMRPWHSTSPFSPYKFFDIVSGKQQQNK
KTMSYINMEEIQVALELVDSLFQQFENRIDFTGKIGVISPYREQMQRMRKEFLRYFGGTI
MQYVDFNTIDGFQGQEKEIIIISCVRADDTQSSVGFLKDFRRMNVAFTRAKASLWILGHQ
QSLIKNKLWRDLIIDAKNRNCLTTAYSGFLNKKNTKPQEIPKKSLPSGAEEFDLYNPSLR
EYLPTNKSSDSAVSLKRVSDDLGSSETSHSSKKPKKDKKHKHSEAKANKGTELKKAKKNR
ENEVTSDKKVKSKEMGESEKKDKHKKDKKVKKEKKENSNKIRTKEKLSDKISKSKEEKFT
SKSSIFKEKSSLNDTTSGTKKKSSIFGGPELTKSSENTGPYIRETKNTTIGRSQKKNRHV
SFQDEVTIIPSKTSSRETISMKDFKHLKESTAQNIRSKSPPPRSPVADNDAYDPLTVNPG
KLSKKDTASSNELGDTPTNHGGMINADITGSVPNSNAANFNSNPLPQDPKSSNGGKPLPS
GPSQGLNMALLPKSPASHKLQEPTSHQTRSIPINAKNFLTDPSEPGSAQIGILREPTVPN
VPISSATAVGSSGVDSNKLGSSEISTSAPDATVNLSSDSSIQNPISQPTSDQLTTSVPQM
KRSLPTGPASRHPSRRTPTSASLFIPKKKRMHNP
NT seq
6945 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaatcctgctttaagtgttatttacgaaagggccaaaagctatttaccaatt
attgaaaaggtctatgcgggaaccaataccaccattccagaagccaatttacttggagat
ctgctacaattactagcggaacttccgccaaatttccatatgttctgtgacccaattctt
gagcccatatcgatcttttgtctgacaatattttcatttaatgaacaggaaactgtacaa
tggttaaagaataaatttaatcctatcctatctcaatgtgataagtgtgttttaaatttt
gctcgaggaaaatgtaaaatgttgcagcattttgcagttcaaagacatgtgccgcatgaa
catgtctctaagttccatgatatcgtatgtctttggagaattgaagcgttgttgccaacc
ctacgaaaaatatccactaatgataacacaactgtttcgattactcctgaaattgacatg
gcgatgttcgaatgtctggcgaatcctcatatgatgagattgaataaaggtttcaagtct
ctctttgacataatattcaagtttttttattcttcaaaacgaccattactcgatgtagat
aaccagtcttccctgcatacatttttagctggtattatttattgttggtgtgaaggtact
aaagaacagatgaactggtcaaaagcttacttaacattaaaacatcgtaagatggaaacg
ataccattatcagaatttactgctgatctactagaagaagtcaatattcatgtgcttttc
ttgcaaaatcccaataattggactaatgtcatagttgctcaattttggtcaagattaata
cctatttttggattatttgataaagacgtgttcatggaatattttcttgttcccaagaac
attgaatctttgaaaaaatcatttggtttccctatagagtctattttcaaattatggtac
aatcatcttggtagagcttacacagataaaccattagattttcttctcagagcattgaat
atgtttgttgaaaaatttggttttgaattttggtcaactattgagccttacaccttccac
agtatcttggatattattttcgatagagatacctttgctataaaattgattagaatccaa
agcaatgaaattcctgaaaatgacatagaaacattattctcattaacaggttcagtaacg
gatttattatcatggacactaccgttttaccatgcattaactccatcgaagagaatccag
atggtgaaaaaggtttctatggcttttttgcgcataatttccactcaagcctcattgaaa
tcaattccaagagcttgcttaatgaattcttccacagctttgcttcgtgccgttttggtt
attaaagatgaagaaagagctactttatacgttaaagatgattttgaaactatattatta
acgaaaacagattcacgagcacttttgaacgatcctgtcattcaagatattttcatatat
tctgcagcaaagccaaatgaattttatcctggcttgggtgattctgcaatgtcagtatct
atttcaacaatgatggttctagcagagtgtgtcaattttgacatattactgttgtgtgaa
cgcacttttaagctttattcaggaaaaaatattggtgaacttccattcactcagacgtta
ctagataaccttaccaaaaaagttgatcttcgttcattccatgatggtccttcgttggcg
aagcagttgttagttgcgttaaaaaatattaacgggctattagttattcccagcaagagt
ccgatagtgcaaaaacataatgtttacattgaaaattttttagcacaagcaactaatttg
atcgaaaagtttactgatattttacctacccaacttgaaaaaattttggcagattcaaat
gcgtctcaaggattttgggcgtgtatattttcatccaataccaaactttatcaagccgca
accaatatcctctatgaaacatttgatgtagagggcagattagagggtatccaagcaata
ttaagcaataatttgacatatcacataaaatctgtaaatattgtcttagaccagttgatc
aaatgtgaattttacgaaccttgtccaagggcaattagagttttgatggatattatcagc
gcctttgcagatccaattaatggtattttttctaactataacacgttaaagaacgatacc
actgatgaggaaatgacaaaattttggcaattatcatggcaatttttggacacaatttac
cgctgcactttgaaatgggcatctaaatatgagtactctgaattagagaactttactaag
gacaccttagaattaagtagatcattagttgactcgtacagggaattttcagatgtcttg
acgaataataaaagagacttatttcaaagtgtcttgaacacttttaagaatatgctttat
tggctgagattaagtgatgattctctgctagaatcttgtgtgagattaatcataaaagca
tccgaaattgcccacgagaagaaaatacgttttgaagacactcttgttgagagcattgcc
aagtatgggtcaaaatcgaagaaattttccaataagttatctgatgctcaaagtcgtgag
attttgaatatggccaaatctttcaattctgatataacgaataaaataatagcagaggct
gaggcataccatgagggaaaaagattagggcatcctgttatcacaataccgtcaagtcca
tctccatctccaactccaactccaacacaagcgagggttgaatcaaaagctgatttttta
cagagaaaagctatgtcttcatccatacttggtaagcccaaagcgtcacagtcgaaaatt
acctcttttggtacacttcagcgtccttccatgtccaatcttcatcaccaaaagccaacg
aaacctgtgtcacaaatggaagtagctagaaggcaacttctaaaaaatagaatagttcat
ccaccaagcgagtcagtttttaatacaaaacccacccgacgtgtaaaacatgaagaaagc
agtagtgatgaaagtggtggtgaggatattgaatctgctagagaattatttgccataagt
aaggagaagaagggcattcaaacattagatattaatggtaaagccatcaaaaaggactct
aaggcagacatagcaaaaagagaggaagaaaatatgcggaaaagattaaacgttgatctt
gggccgttatatgatactattcttcaatgggattatacacgtcgtcatgactatcctgat
gctgaaggaatcgagcattatgctgacgtaaaagatcagtttgactctgctgctgagtac
caaaaaatcatgagacccttgttattattggaatcgtggcaaggtctgtgctctgcccgt
gataggcaagattctagtccatttagtattatcgtgggtaacagaaccgcggtatcggag
ttttatgaagtttatgcatctatgtccaagaatgtgctgcaagatagtggtatctccgat
tcggatttgattgttttggcatattttcccaattataaaagaggtgaccgtttaactact
gaagattttaaacgtgcagaaaacacatgtttggcaaaggttcgttctttcaagaacgtt
aaaggtggaaatgttgatataactttaagaattcatcgtaatcaacagttttcgaagttt
ctaacgctcaggtcagaaattcatgctgtaaaagtgatgcaaatgaccacaatcgaaaga
gaatatcaaacattggagggattagattactacgatctagtcaatcaaattattaaggct
aagcctagtccacaaatgactgttccacctcaagaaatagagttggtgaaacagaattac
aatctgaatacctctcaagcggacgctattgtcaatacagtcgcaaaggatggattttct
ttgattcaaggtccaccagggacgggtaaaaccaagacgattttaggtattataggatac
ttcctctctactagaaaaatgctaccatcaaacgccatcaagactcctaccaattcatcc
acctcatctatgactattgaccaaatgttaaaaaaacagaagatattaatctgtgctccg
agtaatgcagcggttgacgaaatatgtattaggctgaaagatggaatcttcgataggaat
ggtaaattattcagaccaaatctagtgcgtgttgggaggtctgatgttgtgaatgtccaa
attaaagatctcacattagaggaattggtggataaaaggcttgctcaaaagaactacgaa
ttttcaaataatccagaacttgaacggaatttcagtgccgctgtttctaaaagaagaacc
cttagagctcagttagacgccgaagaaggtacgccaactagtaaacttcccacaaatgat
attgccaaaattcagctagaaattagagaactgagtaagcaaattaacgagcttggacga
cagagggatgaaatgcgtgaaaggaactcagtaaactacagaaatagagatctcgataga
cgtaatgcacaggctcaaatattggcatgtagcgatattatatgttcaacgttgtctggg
tcagcacatgatgttctagctggtctagggattaagttcgatacagtgattatagatgag
gcatgccagtgtactgagttatcatcgattattcccttgaggtatggggggaaacgttgc
attatggttggtgatccaaaccaattaccacccacggttctatccggtgcagctagtaat
ttcaaatacaaccaatcactcttcgttagaatggaaaagaacacaacaccatatttattg
gacgttcaataccgtatgcatccagaaattagtaagttcccatccgctgaattttataat
ggaagattgaaggatgggcctaatatggaggaagtcaacatgcgtccatggcattcaacc
tctcccttttctccctataaattcttcgatatcgtgagcggtaagcaacaacagaacaaa
aagacaatgtcttatattaatatggaagaaattcaagtcgctctagaattggtggatagt
ttgtttcagcaattcgagaatagaatagactttacaggtaaaataggtgttatctctcca
tatagagagcaaatgcaacgcatgcggaaagagttccttcgttattttggagggactatt
atgcagtatgttgattttaatacaatcgatgggtttcaaggtcaagagaaagaaataatc
attatatcatgtgttcgtgcagatgatacgcaatctagtgtcggcttcttaaaggatttc
cgtcgtatgaacgttgcttttacaagagcaaaagcaagtttgtggatccttgggcaccaa
caatctttaataaaaaacaaactttggagagatcttattatcgacgccaagaatagaaat
tgccttacaactgcctactcaggattccttaataagaaaaacaccaaaccccaagaaatt
cctaagaaatcattaccaagtggagctgaagaatttgatttatataatccttctttaaga
gagtatctacctacaaataaatcaagtgatagtgctgtttctttaaagagggtcagcgat
gatttaggttcgtcggaaacgtcacattcgagtaagaaacccaagaaagataagaagcat
aagcattctgaagcaaaagcaaataagggcactgaattaaagaaagctaagaagaataga
gaaaatgaagtgacaagtgataagaaagtaaagagcaaagaaatgggtgaaagtgaaaag
aaggacaaacacaaaaaggataagaaggtgaagaaggagaaaaaagaaaactccaataaa
atacgaacaaaggaaaaattgtcagacaaaataagtaaatcaaaagaggaaaaattcacg
agtaaatcaagtatatttaaagaaaaatcgtctttgaatgacaccacgtcaggaaccaaa
aagaaatcgtctatctttgggggaccagaattgactaaatcatctgaaaatactggaccg
tatatccgagaaacgaagaacaccactattggaagaagtcaaaagaagaatagacatgtg
tcattccaggacgaagttactataattccttctaaaacttcatcacgtgaaactatttca
atgaaggatttcaagcatctaaaagaatcaactgctcaaaatattcgttcaaaatccccc
cctccaagaagccctgtggctgataatgacgcttacgatcctctgacagtaaatcccggg
aagttgagtaaaaaagatacagcgtcatctaatgaacttggagatactccaactaatcat
ggaggtatgataaacgcagatataactggatcagtcccaaactctaatgcagctaatttc
aactcaaaccccttgccacaagatcctaaatctagcaatggcgggaaacctttgcctagt
gggccttcacagggactaaatatggcgttacttccaaaatctcccgcatcacataaattg
caagagccaacaagtcaccaaacccgctcaatacctataaatgctaagaactttttaaca
gaccctagtgaacccggaagtgcacaaatcggcattttgcgagaacccactgttcctaac
gtgccaatatcgagtgcaacagcagtagggtcttctggtgttgactcaaacaagctaggt
agttcagaaatttcgacttctgcaccagatgcaacagtaaacttaagttcggattcgtca
attcaaaatccaatatcccagcccacttctgatcaactgaccaccagtgtgcctcaaatg
aaaagatcattacctactggaccggcttcaagacatccatccagaagaacgccaacttct
gcaagtctctttattccaaagaaaaaaagaatgcataacccataa
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integrated database retrieval system
