Candidatus Nitrosomarinus catalina: NMSP_0010
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Entry
NMSP_0010 CDS
T04846
Symbol
vat_1
Name
(GenBank) VCP-like ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nct
Candidatus Nitrosomarinus catalina
Pathway
nct04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
NMSP_0010 (vat_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nct03019
]
NMSP_0010 (vat_1)
03009 Ribosome biogenesis [BR:
nct03009
]
NMSP_0010 (vat_1)
04131 Membrane trafficking [BR:
nct04131
]
NMSP_0010 (vat_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nct04147
]
NMSP_0010 (vat_1)
Messenger RNA biogenesis [BR:
nct03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
NMSP_0010 (vat_1)
Ribosome biogenesis [BR:
nct03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
NMSP_0010 (vat_1)
Membrane trafficking [BR:
nct04131
]
SNARE
SNARE associated proteins
Others
NMSP_0010 (vat_1)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
NMSP_0010 (vat_1)
Exosome [BR:
nct04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NMSP_0010 (vat_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
AAA_2
CDC48_2
TIP49
AAA_14
AAA_lid_PRS2_C
AAA_22
nSTAND3
AAA_33
Mg_chelatase
AAA_7
NPHP3_N
IstB_IS21
RNA_helicase
ABC_tran
Sigma54_activat
AAA_18
AAA_28
Zeta_toxin
AAA_24
AAA_3
Parvo_NS1
AAA_11
DUF815
AAA_17
DUF5906
Sigma54_activ_2
AAA_30
bpMoxR
TsaE
SLFN-g3_helicase
ResIII
Vps4_C
AAA_19
Viral_helicase1
KAP_NTPase
ATPase
Motif
Other DBs
NCBI-ProteinID:
ARS63645
UniProt:
A0A2Z2HI88
LinkDB
All DBs
Position
8952..11093
Genome browser
AA seq
713 aa
AA seq
DB search
MNKIILKINEIPQQHVGKGRAIIDPKIIEEQNWNVGQILELTYNKKTYVKLWPASPEEYG
ASLIKIDGITRQNIGAGLDDKISIKSVEAANAEQITLSPTEKIATDGLQEYMTYNYLNHV
FSNGDTISLNTQMGSKIQFVITNTKPSKPVIVTENTTFKLGSLTKAVDSSVPRITYDELG
GLKNEVQKIREMVELPMRHPELFDKIGVEAPKGVLLYGPPGTGKTLIAKAVAGETNAHFI
SLSGPEIMGKHYGESEEKIREIFTQAEENSPSIIFIDEIDSIAPKRDEVSGELEKRIVSQ
LLTLMDGMKSRGRVVVIAATNRPDSIDPALRRPGRFDREIEIGIPDDDGRLDILSIHTRG
MPINEKVNLKQIAKTTHGFVGADLEILSKEAAMRSLRRILPEIDLEEEKISSEILQKIEI
SNDDFREALKEVRPSALREVQVQIPDVNWDDVGGLDELKDELREAVEWPVKHKEAYDYVD
VEAPKGVLLHGPPGTGKTLIAKALAKMTESNFISIKGPELLSKWVGESEKGVREIFRKAR
QAAPCIIFLDEVDALVPRRGSGSSNSHVTENIVSQILTEIDGLEELHNVLIIGATNRLDI
VDEALLRPGRFDRIIEVGNPDSKGRMHIFKIHTKKKPLENNVDIKKLVEITNGFSGAEIA
AITNRAALVALKRYVGGKSQNIKEIKITQQDLIDAVDKIRPQKKEAPIPQAIK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaataattttaaaaataaatgaaattccacaacaacatgttggtaaaggtcga
gcaattattgatccaaaaataattgaagaacaaaattggaatgttggtcaaatattggaa
ttaacttacaataaaaaaacatatgtcaaactttggccagcatcaccagaagaatatggt
gcaagtttaatcaaaattgatggtattactagacaaaatattggtgcaggattagatgac
aaaatatctattaaatctgttgaagctgcaaatgcagaacaaattaccttatctccaaca
gaaaaaattgcaacagatggattacaagaatacatgacatacaattatcttaatcatgta
ttttctaatggagatacaatatctcttaatacacaaatgggaagtaaaattcaatttgtt
ataacaaacacaaaaccatcaaaaccagtgattgttactgaaaatactacattcaaactt
ggttcattaactaaagctgttgattcttctgtaccaagaatcacatatgatgaattggga
ggtctaaaaaatgaagttcaaaaaattcgtgaaatggtagaattaccaatgcgtcatcct
gaattatttgataaaataggcgtagaagcaccaaaaggcgttttactttatggtccacca
ggaactggtaaaactttgattgcaaaagcagtagctggagaaacaaatgctcattttatt
tctctaagtggacctgaaattatgggcaaacattatggagaaagtgaagaaaaaattaga
gaaatctttactcaagccgaggaaaattctcctagtatcatcttcattgatgaaatagac
tcaattgctccaaaaagagatgaagtttcaggagaactggagaaaagaatagtatctcaa
ttattgacgttaatggatggtatgaaatctagaggtagagttgtagtgatagcagctact
aacagacctgattctattgatccagcattaagacgaccaggaagatttgatagagaaatt
gaaattggaattcctgatgatgatggtagactggatattctttcaattcatacacgtgga
atgccaattaacgaaaaagtcaatctgaaacaaatcgcaaaaaccactcatggatttgtt
ggggctgatttagaaattttatcaaaggaagcagcaatgagatcattgcgtagaattctt
ccagagattgatcttgaagaagagaaaatttcatcagaaattcttcaaaaaattgaaatt
agtaacgatgattttcgagaagcattaaaagaagttagaccaagtgcactaagagaagtt
caggttcaaattcctgatgtaaattgggatgatgttggaggtcttgatgaattaaaagat
gaattacgtgaagctgttgaatggcctgttaaacataaagaagcatatgactatgttgat
gtagaagctccaaaaggcgttttattacatggtccaccaggaactggtaaaactttgatt
gcaaaagcacttgcaaaaatgactgaatctaatttcattagtatcaaaggacctgaatta
ttatcaaagtgggtaggtgagtctgaaaaaggagttagagaaatttttagaaaagcacga
caggcagcaccatgtataatatttttagacgaagttgatgcactcgtaccaagaagaggt
agtggaagttctaattcacatgtaacagaaaacatcgtttcacaaattcttactgaaata
gatggattagaagaattacataatgtgttgattattggagcaacaaatcgattggatatt
gttgatgaagcacttttacgacctggaaggtttgacagaataattgaagtaggaaatccc
gattctaaaggaagaatgcatatttttaaaattcataccaaaaagaaaccacttgaaaat
aatgtggatatcaaaaaattagtagaaataacaaatggatttagtggtgcagaaatagct
gcaattaccaatagagcggctttagttgcattgaaaagatatgttggtggtaaatctcaa
aatatcaaggaaattaaaattacgcaacaggatttgatcgatgctgttgataagataaga
cctcaaaaaaaggaagcacctatacctcaagccataaaatag
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