Candidatus Nitrosomarinus catalina: NMSP_0083
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Entry
NMSP_0083 CDS
T04846
Name
(GenBank) Deoxyribodipyrimidine photo-lyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
nct
Candidatus Nitrosomarinus catalina
Brite
KEGG Orthology (KO) [BR:
nct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nct03400
]
NMSP_0083
Enzymes [BR:
nct01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
NMSP_0083
DNA repair and recombination proteins [BR:
nct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
NMSP_0083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
ARS63717
UniProt:
A0A2Z2HHN3
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All DBs
Position
complement(66647..68161)
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AA seq
504 aa
AA seq
DB search
MIRNLIVILGDQLSLEISSLEKIRKNEDKILMMEVSNEIEYVNHHRKKLVLLFSAMRHFA
DELKKNKFDVTYVEFNKSEKNFTMELNRQCKKFNPKSIKITHPSEYRVLNEVKKWEKLLG
IPVTIIEDTRFFCKIDEFSDWAESRKELKMENFYQQMRKKYKILIDDKEKPIGGKWNYDV
KNRKRLPKNHPEIPSPLICKPDKITKRVITQLNKKYTKHFGDLEPFWFATTKQDAVKSLD
DFIKNRLEFFGPYEDAMKEKEKFLYHSVLSIYLNIGLLNPHEVIEKVLQKKDLPIESIEG
FVRQILGWREYVRGIYWHFMPKYNQTNFFNAKNKIPNFYWDGKTKMNCMKNCIEQTKQEA
YAHHIQRLMITGNFALIAGIEPKQVCDWYLSVYADAFEWVELPNTHGMILYADGGILGSK
PYAASGNYINKMSDYCKNCEYDVKLKNGKNACPFNYLYWNFFLKNQNKLKKNPRLWTVFS
TIKNMSEDKKKQIKDDSEKFLKTI
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
ttgattcgtaatttaatagtaatattaggagatcaattatctttagagatttcatcatta
gaaaaaattagaaaaaatgaagataaaatattgatgatggaagtttcaaatgaaatagaa
tatgtaaatcatcataggaaaaaacttgttttattatttagtgcaatgcgtcattttgca
gatgagcttaaaaaaaataagtttgatgtaacatatgttgaatttaataaatcagagaaa
aattttacaatggaattaaatcgccaatgtaagaagtttaatccaaaatctatcaaaatt
acacatcctagcgaatatcgtgtcttaaacgaggtaaaaaagtgggaaaaattactgggt
attccagttaccattatagaagatacaagatttttttgtaaaatagatgaattttcagat
tgggcagagtctagaaaagaactcaaaatggaaaatttttatcagcaaatgagaaaaaaa
tacaaaattctaattgatgataaagaaaaaccaattggtggaaaatggaattatgatgtt
aaaaatagaaaaagactaccaaaaaatcatccagaaattccttctccattaatttgtaaa
ccagataaaattacaaagcgtgtaattacacaattaaataaaaaatatacaaaacatttt
ggagatttagaaccattttggtttgcaacaacaaaacaagatgcagtaaaaagtttagat
gattttattaaaaacaggttagaattttttggtccatatgaagatgcaatgaaagaaaaa
gaaaaatttctttatcattcagttttatcaatttatcttaacataggcttactaaatcca
catgaagtaattgaaaaagttttacaaaaaaaggatttaccaattgaatcaatagaagga
tttgtaagacaaattttaggatggagagaatatgtaagaggaatttactggcactttatg
ccaaaatataatcaaacaaatttttttaatgcaaaaaataaaattccaaatttttactgg
gatggaaaaacaaaaatgaattgtatgaaaaactgtattgaacagactaaacaagaagca
tatgcacatcacattcaaaggttaatgattactggaaattttgcactaattgcaggaatt
gagcctaaacaagtttgtgattggtatctatcggtatatgcagatgcttttgaatgggta
gaattgcctaatacacatggaatgattctttatgctgatggaggaattctgggttctaaa
ccatatgctgcaagtggaaattacatcaataaaatgtcagactattgtaagaattgtgaa
tatgatgttaaattaaaaaatggtaaaaatgcatgtccatttaattatctttattggaac
ttttttttaaaaaatcaaaacaaattaaaaaagaatccaagactttggacagtcttttca
actattaaaaatatgtcagaagataagaaaaaacaaatcaaagatgattcagaaaaattt
ttgaaaacaatatga
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