Candidatus Nitrosomarinus catalina: NMSP_0119
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Entry
NMSP_0119 CDS
T04846
Name
(GenBank) Sugar-specific transcriptional regulator TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
nct
Candidatus Nitrosomarinus catalina
Brite
KEGG Orthology (KO) [BR:
nct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nct03000
]
NMSP_0119
Transcription factors [BR:
nct03000
]
Prokaryotic type
Helix-turn-helix
Other families
NMSP_0119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
Regulator_TrmB
HTH_IclR
HTH_27
HTH_24
PLDc_2
Penicillinase_R
MarR
MarR_2
DUF7343
PadR
HTH_34
Motif
Other DBs
NCBI-ProteinID:
ARS63751
UniProt:
A0A2Z2HHP4
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All DBs
Position
complement(98455..99222)
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AA seq
255 aa
AA seq
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MSISDKTKKSLEKIGLTSYEIKTFSALLKSGEMTASDLSQKSGVPYSKIYEVLGTLEEKG
WIGSDDSRPTKYFAKSPATGVESTKQKMENDFLQNQNVILNELVPLYEKSGISEKPDIWV
LSGAINITAKILEMVDSCRDEVMITLPEAGVELVKQALPKLRALHDKGVKITILTSDKID
KESITAIKRVAEVKIKKGLFGGGIISDKRYVVILLGPEIAGENSSDIIAIWADHIGLAGI
ARQYFEYLLKDSKKV
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgagcatatcagataaaacaaaaaagtcactagaaaaaattggtcttacaagttatgaa
atcaaaacattttctgcattactaaagtctggagaaatgacagcatctgatcttagtcaa
aaatcaggtgtgccatattcaaaaatctatgaagttttagggacactagaagaaaaagga
tggattggctcagatgattcaagaccaacaaaatattttgcaaaatcaccagcaacagga
gtagaaagtacaaaacaaaagatggaaaatgattttctacaaaatcaaaatgtaatttta
aatgaattagttccactgtatgaaaaaagtggtataagtgaaaaaccagatatttgggtt
ttatcaggggcaattaacattactgcaaaaattttagagatggtagatagttgcagagac
gaagtaatgatcacactgccagaagcgggtgtagaattagttaaacaagcattaccaaaa
ttaagagcattacacgataaaggagtaaaaattacaattcttacatcagataaaatcgat
aaagaatcaattacagcaatcaaaagagtcgcagaagttaaaattaagaaaggtttgttt
ggaggtggaataatctcggataaaagatacgttgtgattttattaggtcctgaaattgca
ggtgaaaattcatctgatattattgcaatttgggctgatcatattggtttagctggaatt
gcacgtcaatatttcgaatatttattaaaagattcaaagaaggtatag
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