Candidatus Nitrosomarinus catalinensis: NMSP_0593
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Entry
NMSP_0593 CDS
T04846
Symbol
endA_1
Name
(GenBank) tRNA-splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
nct
Candidatus Nitrosomarinus catalinensis
Brite
KEGG Orthology (KO) [BR:
nct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nct03016
]
NMSP_0593 (endA_1)
Enzymes [BR:
nct01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
NMSP_0593 (endA_1)
Transfer RNA biogenesis [BR:
nct03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
NMSP_0593 (endA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
TSEN34_N
Motif
Other DBs
NCBI-ProteinID:
ARS64214
UniProt:
A0A2Z2HJE3
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All DBs
Position
complement(491569..492105)
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AA seq
178 aa
AA seq
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MKSELIENRIIVWNIEDSKKLFSEGYYGKPIGMPKPKIEEIDVPLILDLIEGYYLLEMKK
ITITKLKQKIKTDEMIEICKKEVHDFEKKYIVYKNFRDKGYIINPGIKFGCDFAVYEKGP
GIDHAPFLIQVYNRNEPITSTGIVLAGRLATTVRKQFILAIPKGKDKVDFLALDWWKA
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtgaattaatagaaaatagaattatcgtatggaatattgaagattcaaagaaa
cttttcagcgaagggtattacggaaaaccaataggaatgcctaaaccaaaaattgaagag
attgatgttccattaattttagatttaattgaaggatattacttgttagaaatgaaaaaa
attaccatcaccaaattaaaacaaaaaatcaaaacagatgaaatgattgaaatttgtaaa
aaagaagtacatgattttgaaaaaaagtatattgtatacaaaaatttcagagacaaagga
tacataattaatccaggaattaaatttggatgtgattttgcagtatatgaaaaaggtcca
ggaattgatcatgcaccatttttaattcaggtgtataacagaaatgagccaataacatcc
acaggaattgttcttgcaggacgattagctacaacagttagaaaacaattcattttagct
attccaaaaggaaaggataaagtagattttctcgcactagattggtggaaagcttaa
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