Candidatus Nitrosomarinus catalinensis: NMSP_0953
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Entry
NMSP_0953 CDS
T04846
Symbol
tfb_4
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nct
Candidatus Nitrosomarinus catalinensis
Pathway
nct03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nct00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NMSP_0953 (tfb_4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nct03021
]
NMSP_0953 (tfb_4)
Transcription machinery [BR:
nct03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NMSP_0953 (tfb_4)
Prokaryotic type
Archaeal type
TFB
NMSP_0953 (tfb_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
Cyclin_N
Motif
Other DBs
NCBI-ProteinID:
ARS64572
UniProt:
A0A2Z2HKL1
LinkDB
All DBs
Position
753114..754025
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AA seq
303 aa
AA seq
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MLTELVHQENCKKHEIVTDMHTGEIACSNCGIVSSEPIVDLGAEMPGGSSADYQNNSRVG
AKRSLKMIDMGLSTLIEAKDKDVTGKSLSVENRRMFYRLRMWDRNSRSAVTSKSFQKAFT
LLDAISSKLGLPESVVEESAYLFRKIAARKILAGRSTAAMLSATIYATCRITDTPRTLQD
ISDAANIKKKVLQRTYRFLAKEMDISPESYTPSEFVTRIAKGLTLSEKTQRLSFKILDLC
AKKHVSTSKNPMAMAAAAIHLAATTNGEKVSQLKISKMSGISAVTIRERRKEIVNKIGDV
KVG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgttaactgaattagtacatcaagaaaattgtaagaaacatgaaatagttacagacatg
catactggggagattgcatgtagtaactgcggaatagtatcatcagaaccaattgttgat
ctaggagctgaaatgccaggaggaagttcagcagattaccaaaataattcaagagttgga
gcaaaaagatctttaaagatgatagacatgggactgtctacattaattgaagctaaagat
aaggacgtaacaggtaaatcactgtcagtagaaaacagacgaatgttttacagattaaga
atgtgggacagaaacagtcgctcagctgtcacatcaaaatcgtttcaaaaggcattcact
ttacttgatgcaataagttcaaagctaggtctgcctgaatcagtagtcgaagaaagtgca
tatttgtttagaaaaattgcagcaagaaagattcttgcaggaagatcaacagcagctatg
ttatctgccacaatttatgcaacatgcagaattacagatacgcctagaacactacaagac
atttctgatgcagcaaacattaagaaaaaagttctacaaagaacatacagattccttgca
aaagagatggacatatcacctgagtcatacacaccatcagaatttgtcaccagaattgca
aaggggttaactttgtcagaaaaaacacaaagacttagcttcaaaatacttgatttgtgc
gcaaaaaagcacgtttctacaagtaaaaatccaatggccatggcagcagctgcaatacac
ctagcagcaacaaccaatggtgaaaaagtatcacagctaaaaatatccaaaatgtcagga
attagtgctgttaccataagagaaagaagaaaagaaattgtcaataagataggagatgta
aaagttgggtag
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