Candidatus Nitrosomarinus catalinensis: NMSP_1021
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Entry
NMSP_1021 CDS
T04846
Name
(GenBank) Collagen triple helix repeat (20 copies)
Organism
nct
Candidatus Nitrosomarinus catalinensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-ProteinID:
ARS64639
UniProt:
A0A2Z2HP87
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Position
complement(805247..806908)
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AA seq
553 aa
AA seq
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MSSQPRIEIQGQAPFKQSGVYEAQISIIDVKPSDDDIRAKKFTPLWRGNFHLKVKDGVFS
EILGDSKNPLPSSVDNLNTIWIVVNDLFSSVYSVFDVTLRKTSEIAESQEKPAEKPAEKP
AEKPAEKPSKPKRSTKNISISDNNAPRGIRGPSGDKGETGATGPTGDKGQSGPSGDKGDK
GKTGPTGDKGDKGATGPTGDKGSTGDRGLSGDKGLSGQKGITGDKGDKGDKGVTGPPGDK
GDKGATGPTGDKGQSGLKGATGPLGEKGPTGLPGDKGTSGIRGAPGDKGDKGPQGPPGDK
GLTGPVGVPGEKGPTGTSGVQGEKGIQGSPGPIGDKGVTGPSGDKGPIGPPGPVGVKGIT
GPAGPLGDKGPLGPPGPLGDKGSKGPEGPSGDKGPQGPQGPAGAKGLTGVPGPQGEKGDK
GPLGPIGEKGNTGASGPPGDKGPQGPQGTQGERGTTGPSGEKGPQGPQGIQGPQGERGPT
GPIGSIGESGPIGGQGPVGPAGPRGPPGPPGEKGPSGGMSSEQKAIFKELLEILTNKDII
STEEQIKLMSYLY
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttctcaaccgcgaatagagattcaagggcaggctccttttaaacaatctggagta
tacgaagctcaaatttcaattattgatgtaaagccttctgatgatgacattcgtgccaaa
aaattcactcctttatggaggggaaattttcatttaaaagtaaaagatggtgtcttttct
gaaatactgggtgattctaaaaatcctcttccttcttcagttgataatttgaatacaatt
tggattgttgttaatgatttgttttcttcagtatattctgtttttgatgtaacgttaaga
aaaacttctgaaattgctgaatctcaggagaaacctgcagagaaacctgcagagaaacct
gcagagaaacctgcagagaaaccttctaaacctaaacgctctacaaaaaatatttccatt
tctgataataatgcacctcgaggtattagaggtccctctggagacaaaggtgaaactggt
gcaactggtccaactggtgacaaaggtcaatctggtccctctggagacaaaggtgacaaa
ggtaaaactggtccaactggagacaaaggtgacaaaggtgcaactggtccaactggagac
aaaggttccactggtgatagaggactttctggagacaaaggactttctggacaaaaaggt
atcactggagacaaaggagacaaaggtgacaaaggagttactggccctcctggagacaaa
ggtgacaaaggtgcaactggtccaactggtgacaaaggtcaatctggattaaaaggtgca
actggtcctcttggagaaaaaggtccaactggactacctggtgacaaaggaacttctgga
atccgtggagctcctggagacaaaggtgacaaaggtccacaaggtcctcctggagacaaa
ggactaaccggacctgttggagttcccggagaaaaaggtccaactggaacttcaggagtt
caaggagaaaaaggaattcaaggttcccctggcccaattggtgacaaaggagtaactggt
ccctctggtgacaaaggtcctattggtccacctggacctgttggagttaaaggaataacc
ggacctgctggtcctcttggtgacaaaggtcctcttggtccacctggtcctcttggagac
aaaggaagtaaaggacctgaaggtccctctggagacaaaggtccacaaggtccacaaggt
ccagctggtgctaaaggattaactggagtccctggacctcaaggtgaaaagggtgacaaa
ggtcctcttggcccaattggagaaaaaggaaatactggtgcatctggtcctcctggagac
aaaggtccacaaggtccacaaggaacacaaggtgaacgtggaactactggtccctctgga
gaaaaaggtccacaaggtccacaaggaattcaaggtcctcaaggtgaacgtggtccaact
ggtcctattggttcaattggagaatctggtccaattggtggtcaaggtcctgtaggacct
gctggccctagaggtcctcctggtcctcctggagaaaaaggtccctctggaggaatgtct
tctgaacaaaaagcaattttcaaagaactattggaaattttgacaaataaagacatcatt
agtactgaagaacaaattaaactgatgagttatttgtattaa
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