Candidatus Nitrosomarinus catalinensis: NMSP_1157
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Entry
NMSP_1157 CDS
T04846
Symbol
tfb_5
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nct
Candidatus Nitrosomarinus catalinensis
Pathway
nct03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nct00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NMSP_1157 (tfb_5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nct03021
]
NMSP_1157 (tfb_5)
Transcription machinery [BR:
nct03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NMSP_1157 (tfb_5)
Prokaryotic type
Archaeal type
TFB
NMSP_1157 (tfb_5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Auto_anti-p27
Cyclin_C
RPA_interact_C
Motif
Other DBs
NCBI-ProteinID:
ARS64773
UniProt:
A0A2Z2HLE1
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All DBs
Position
914566..915522
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AA seq
318 aa
AA seq
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MNILQTENCPECKSSLIDDMQNGEIICSGCGVVVDDQITDSGPETISSNLEDKMKLARAT
GQTTYSQHDLGITTEISISAKDFSGKRINHEVANQMNHLRKWQQRVRVSTPKERRLASVL
AKMGETCESLNLSKNVLETTSMIYRNLDGHMDVKGKSVVCITAATIYMACKQCDVVRSLE
EICREIVPAKDVKSKTKLAARYYRTMVMEMGAIKAPVLTMDKYISKIANMTQTEVRVERL
ALEIAEKTKDNSISDGKSPNGIAAAYLYVSSVLLGQNVLQRDVSSIAGVTEVTIRNRCKE
ILTNHKLKITLRPSLAKY
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaacatattacaaaccgaaaactgtccagaatgcaaatcatcattgattgatgatatg
caaaatggcgaaataatctgttctggttgtggagtagttgtcgatgaccagattacagat
agtggtccagaaacaataagttcgaatctcgaagacaaaatgaagcttgcaagagcaaca
ggacaaacaacctattctcaacacgatttgggaataacaactgagatttcaattagtgca
aaagacttcagtggaaaaaggattaatcacgaagttgcaaaccaaatgaatcatctcaga
aaatggcaacaaagagtaagagtatcaacaccaaaagaaagacgactcgcaagtgtttta
gcaaaaatgggcgaaacatgtgaatcacttaatctttcaaaaaatgtgttggaaacaact
tcaatgatctatagaaatttagacggacacatggatgtcaaaggaaaatcagttgtatgc
attacagcagcaacaatctacatggcatgcaaacaatgcgatgtggtaagatcattagaa
gaaatttgccgagaaattgttccagcaaaagatgttaaatcaaaaacaaaacttgcagca
agatattacagaaccatggtaatggaaatgggtgcaattaaagctccagtacttactatg
gacaaatacatctcaaagatagcaaacatgacacaaacagaggttagagtagaaagacta
gccttagaaattgcagaaaagacaaaagacaacagtatttcagatggaaaatctccaaat
ggaattgctgcagcatatctttatgtctcatcagtactacttggacaaaatgtactacaa
agagacgtttcaagtattgcaggagtaacagaagtcactatcagaaatagatgtaaagag
attctaacaaatcataaactcaaaattactttgagaccttctctggccaaatattaa
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