Candidatus Nitrosomarinus catalinensis: NMSP_1275
Help
Entry
NMSP_1275 CDS
T04846
Symbol
endA_2
Name
(GenBank) tRNA-splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
nct
Candidatus Nitrosomarinus catalinensis
Brite
KEGG Orthology (KO) [BR:
nct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nct03016
]
NMSP_1275 (endA_2)
Enzymes [BR:
nct01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
NMSP_1275 (endA_2)
Transfer RNA biogenesis [BR:
nct03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
NMSP_1275 (endA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
ARS64890
UniProt:
A0A2Z2HVV7
LinkDB
All DBs
Position
complement(1006005..1006568)
Genome browser
AA seq
187 aa
AA seq
DB search
MDETIEVRGDLILDQACISEHKMIHDLEQKGFGEITKGKLFLKSFETLYLLYTRKLFLKK
NKKQIDFDTFMNICQKTNPEILTKFLIFRDLKTRGYVVKDGFGFGSDFRVYERGHFGEKG
AKFLIFGLNEGQQEKMGALQKKIDEITQMGKEPIIAVIERRGEVIYYKINKMNFLENKSR
LEGNFEF
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggatgagactattgaagttagaggagacttgattttagatcaagcctgtatttccgaa
cataagatgatccatgatcttgagcaaaagggatttggtgaaatcactaaagggaaatta
tttctaaagtcttttgaaacattgtatttgctatatactcgtaaattatttctaaagaaa
aataaaaaacaaattgattttgatacttttatgaatatttgtcaaaaaacaaatcctgag
attctaacaaaatttttgatatttagagatctaaagaccagaggatatgttgttaaagac
ggatttggatttggttctgattttcgagtttatgaaaggggccattttggtgagaagggt
gccaaattcttgatttttggtcttaacgaagggcaacaagagaagatgggcgcattacaa
aaaaagattgatgagattactcaaatgggaaaagagcctattattgcagtaattgaaaga
cgtggtgaagtaatttattacaaaatcaataaaatgaatttcctagaaaataaaagccgt
ttagaaggaaattttgaattttag
DBGET
integrated database retrieval system
