KEGG   Candidatus Nitrosomarinus catalinensis: NMSP_1290
Entry
NMSP_1290         CDS       T04846                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
nct  Candidatus Nitrosomarinus catalinensis
Pathway
nct03420  Nucleotide excision repair
nct03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:nct00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    NMSP_1290
   03460 Fanconi anemia pathway
    NMSP_1290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nct03032]
    NMSP_1290
   03400 DNA repair and recombination proteins [BR:nct03400]
    NMSP_1290
DNA replication proteins [BR:nct03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    NMSP_1290
DNA repair and recombination proteins [BR:nct03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     NMSP_1290
SSDB
Motif
Pfam: ERCC4 HHH_5 HHH HHH_2 HHH_3 HHH_8 5_3_exonuc UPF0758_N RecR_HhH
Other DBs
NCBI-ProteinID: ARS64904
UniProt: A0A2Z2HLV3
LinkDB
Position
complement(1017779..1018459)
AA seq 226 aa
MKLENLRIIVDERETKSGIPKLLKAIGMNVEMKTLPIGDYIVAPETIVERKSIKDLMASV
FDGRLYDQCSRLKEHFANPIVLLEGNVDEIEEITDNPLVFYGAISRVALEFKIPIIPTPS
ASHTAKLLVSMCSKKDGPTGPYLKKIKKSSNLETQQLSTLCSLPGIGEKFAVRMLEKFGT
PSKVFSATTSELAKVEGLGEARAKKIKNMLTTKNKLQKESSQKTLT
NT seq 681 nt   +upstreamnt  +downstreamnt
gtgaaattagaaaatcttcgaataattgttgatgaacgagaaactaaaagtggaattcca
aaattactcaaagcaattggcatgaatgtggaaatgaaaacacttccaattggtgattat
attgttgcacctgaaaccattgttgaaagaaaaagtatcaaggatttgatggcttctgtt
tttgatggaagattatatgaccaatgcagtagactcaaagagcattttgcaaatcctata
gttttactagaaggaaatgttgatgaaattgaagagattactgacaatcccttagttttc
tatggtgctatttctcgagttgctttggaatttaaaattcctataatccctaccccaagt
gcatctcacactgcaaaattattagtttcaatgtgttctaaaaaagatgggccaacaggt
ccttacttgaaaaaaattaaaaaatcatcaaatttagaaactcagcaattatccacactt
tgtagtttgcctggaattggtgaaaaatttgcagttcgaatgcttgaaaaatttggtact
ccatcaaaagtttttagcgcaaccacttctgaattggccaaagttgagggattgggtgaa
gctcgtgcaaaaaaaatcaaaaacatgttgacaactaaaaataaacttcaaaaggaaagt
tcccaaaagacattgacataa

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