Candidatus Nitrosomarinus catalina: NMSP_1295
Help
Entry
NMSP_1295 CDS
T04846
Name
(GenBank) Exosome complex component Rrp41
KO
K11600
exosome complex component RRP41
Organism
nct
Candidatus Nitrosomarinus catalina
Pathway
nct03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NMSP_1295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nct03019
]
NMSP_1295
Messenger RNA biogenesis [BR:
nct03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
NMSP_1295
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
NMSP_1295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
ARS64909
UniProt:
A0A2Z2HQL0
LinkDB
All DBs
Position
complement(1020190..1020924)
Genome browser
AA seq
244 aa
AA seq
DB search
MGGRDATMVLLDENGIRCDGRKIDEPRRIMIKAGGLKNADGSAYIEFGDNKILVGVFGPR
DVHPKHMSNTDTGILRVRYHMEPFSVGERKRPAPSRREIEISKVIKEALEPAVMLEKFPR
TAVDVFIEVLQADGGTRCAALTAASVALADAGIPMRDMVAAIASGKVADTIILDVNNEED
QAGQADMPIGYMPSMKKITLLQLDGVLTPEEYKKCVDVGVKGCEVVYELQKKALHDKYFG
NRGD
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgggtggacgagatgcaaccatggtcttattggacgaaaatggcattcgctgtgatgga
cgtaaaatagacgaaccacgcagaattatgattaaagccggcggactaaaaaatgctgat
ggctctgcttacattgaatttggcgataacaaaattttagttggtgtatttggaccaaga
gatgttcatccaaaacacatgtcaaatactgacactggaattttaagagttagatatcac
atggaaccattttctgttggtgaacgaaaaagaccagcaccttcaagaagagaaattgaa
atatctaaagtaatcaaagaagcattagaacctgcagtaatgttggagaaattcccaaga
actgcagttgatgtatttattgaagttttacaggctgatggtggaactagatgtgctgcc
cttaccgcagcatctgttgcattagctgatgctggtatcccgatgagagatatggttgca
gcaattgcttcaggtaaagtagcagatacaattattcttgatgttaacaatgaagaggat
caagcaggtcaagccgatatgccaattggatatatgccaagtatgaaaaaaattacttta
ttacaattagacggtgtcttaactccagaagaatacaaaaaatgtgttgatgttggagtt
aaaggatgtgaggttgtttatgaacttcaaaagaaagcactacatgacaagtactttgga
aaccggggagattag
DBGET
integrated database retrieval system
