Candidatus Nitrosomarinus catalina: NMSP_1298
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Entry
NMSP_1298 CDS
T04846
Symbol
rpoD
Name
(GenBank) DNA-directed RNA polymerase subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
nct
Candidatus Nitrosomarinus catalina
Pathway
nct03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nct00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NMSP_1298 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nct03021
]
NMSP_1298 (rpoD)
Enzymes [BR:
nct01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NMSP_1298 (rpoD)
Transcription machinery [BR:
nct03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
NMSP_1298 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
ARS64912
UniProt:
A0A2Z2HLP1
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All DBs
Position
1022349..1022975
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AA seq
208 aa
AA seq
DB search
MHFDDFQQDLSSLDVITKDSEKIALKLKGVPLQYANALRRVCLNGVPVFAIDTVDIIENT
SVLPDEGLAHRLGLIPLKTDLSKYNESDKILLVLDSGISEETRTVLSGELSSEDESIKPV
SEKVPIVQLAPGQKIKVECYARLGRGTEHAKWNASNVAMLTDTDKDDEKILTIESTGALN
PEQIVLEGVEEVSRRVVEFKDMINNIEE
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
gtgcactttgacgattttcaacaagatttgtcatcattagacgttattacaaaagattct
gaaaagatagccttaaagctaaaaggtgttccattacaatatgcaaatgctttaagacgt
gtttgtttaaacggagttccagtttttgcaattgatacagtagacattattgaaaacaca
tctgttttacctgacgagggtttagctcacagattgggtttgattccattaaaaacagat
ttgagtaaatataatgaatcagataaaatcctactagtgttagattcaggaatatctgaa
gaaactagaactgtattatcaggagaattatcttctgaagatgagagtattaagccagta
tctgaaaaagttccaattgttcaattggccccaggtcaaaaaatcaaagtcgaatgttat
gcaagactaggacgtggcacagaacatgcaaagtggaatgcttctaacgttgctatgctc
acagatactgacaaagatgatgagaaaatactcaccatagagtcaacaggagcactaaat
ccagaacaaattgttctagaaggagtagaagaagttagtagaagagttgttgaattcaaa
gatatgatcaacaatatcgaggaatag
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