Candidatus Nitrosomarinus catalina: NMSP_1319
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Entry
NMSP_1319 CDS
T04846
Symbol
truB
Name
(GenBank) putative tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nct
Candidatus Nitrosomarinus catalina
Brite
KEGG Orthology (KO) [BR:
nct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nct03016
]
NMSP_1319 (truB)
Enzymes [BR:
nct01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NMSP_1319 (truB)
Transfer RNA biogenesis [BR:
nct03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NMSP_1319 (truB)
Prokaryotic type
NMSP_1319 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
ARS64933
UniProt:
A0A2Z2HLV4
LinkDB
All DBs
Position
complement(1038219..1039220)
Genome browser
AA seq
333 aa
AA seq
DB search
MTLKQLENLIEIDQDITDESYGTYYDKRTIEQLLDNGIILLDKPPGPTSHETVAWTKRIL
KIDKIGHSGTLDPQVSGVLPLGLGEATKALGVLLYGPKEYHALGRVHSLPSKEKLSEIIE
MFTGEIFQKPPQRSAVVRQTRTRTIYELELIEQKERLLLTRILCEAGTYIRKLYYDIGEV
LGPGATMIELRRSRVDQFHEKDGLVTLHELADAFAIWEEKKDDSKLMEIIKPVELALSEL
KSVVIRDSAVDAMCHGAQLAIPGILKISPHLREGDIVGIYTQKGEAVALAESTMDEEQIR
DATKGYAFVTKRIIMAPNTYPKKWRTKPTAPKD
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgactttaaaacaacttgaaaatttaattgaaattgatcaagatatcactgatgaatcc
tatggaacttattatgataaacgaacaatcgagcaattattggacaatggaattattctt
ttagataaaccaccaggtccgacaagtcatgaaacagttgcatggacaaaacgcattttg
aaaattgacaaaataggacatagtggaacattagacccacaagtttctggagtattaccg
ctaggattaggtgaagcgacaaaggcattaggagttttactttatggacctaaggagtat
catgcattgggtagagttcattcattgccttctaaagaaaaattatctgaaattattgaa
atgtttactggcgaaatttttcaaaaacctccacaacgttctgctgttgttagacaaaca
agaacaagaacaatttatgaattagaattaatcgaacaaaaagaaagattacttttaact
agaattctatgtgaagcaggaacctatattagaaaattatactatgatattggcgaagtt
ttaggtcctggagcaactatgattgaactaaggcgtagtcgtgtagaccaatttcatgaa
aaagatggattagttactttgcatgagcttgctgatgcatttgctatttgggaagaaaaa
aaagatgattcaaaattaatggaaataataaaaccagttgaacttgcattaagcgaatta
aaatctgtagtaattcgtgattcagctgttgatgcaatgtgtcatggtgctcaacttgca
atacctggaattttgaaaatttctccacatttgagagaaggtgatattgttggaatttat
acgcaaaaaggtgaagcagttgcattagctgaatcaacaatggatgaagaacaaattcgt
gatgcaaccaaaggatatgcatttgttactaaaagaattatcatggctcctaacacttat
cctaaaaaatggagaacaaaacctactgctccaaaagattaa
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