Candidatus Nitrosomarinus catalina: NMSP_1339
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Entry
NMSP_1339 CDS
T04846
Symbol
spt5
Name
(GenBank) Transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
nct
Candidatus Nitrosomarinus catalina
Pathway
nct03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
nct00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
NMSP_1339 (spt5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nct03021
]
NMSP_1339 (spt5)
03019 Messenger RNA biogenesis [BR:
nct03019
]
NMSP_1339 (spt5)
Transcription machinery [BR:
nct03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
NMSP_1339 (spt5)
RNA polymerase I system
NMSP_1339 (spt5)
Messenger RNA biogenesis [BR:
nct03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
NMSP_1339 (spt5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
Motif
Other DBs
NCBI-ProteinID:
ARS64953
UniProt:
A0A2Z2HLX1
LinkDB
All DBs
Position
1054093..1054551
Genome browser
AA seq
152 aa
AA seq
DB search
MSEEIKSHLFAIRTTGGQEKVVMRLLEAKANANQINIQSVLLVDNLKGYVVIEAINPSDA
YMAVEGVRHIRGQLRGELEFKDIEGYLVKKSTVSTLEVDNIIEITGGPFKGMKATITRID
ADKEEATVVLLDASYQLPVTVDANYLKLSSGA
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgaagaaattaaatcacatttatttgcaattagaaccactgggggtcaagaaaaa
gtggtaatgagattattagaagctaaagcaaatgccaatcaaattaacattcaatcagtt
ttactagttgacaatcttaagggatatgttgtaatcgaagcaattaatccgagcgatgca
tatatggcagtagaaggagtcagacatattcgtggtcaattaagaggagaattagaattc
aaagatatcgaaggttatcttgtcaagaaatcaacagtttcaacattagaagtagataat
attattgaaattaccggcggaccattcaaaggaatgaaagcaacaattactagaatagat
gcagataaagaagaagcaacagttgtgttacttgatgcatcttatcaattaccagtaact
gtagatgcaaattatcttaaactctcgagtggagcttag
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