Candidatus Nitrosomarinus catalina: NMSP_1468
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Entry
NMSP_1468 CDS
T04846
Name
(GenBank) Putative ski2-type helicase
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
nct
Candidatus Nitrosomarinus catalina
Brite
KEGG Orthology (KO) [BR:
nct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nct03400
]
NMSP_1468
Enzymes [BR:
nct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NMSP_1468
DNA repair and recombination proteins [BR:
nct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
NMSP_1468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_dom4_arc
Helicase_C
ResIII
DEXQc_Suv3
HHH_5
HHH_2
DNA_pol_lambd_f
HTH_61
ATPase_2
AAA_25
nSTAND3
DnaB_C
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
ARS65074
UniProt:
A0A2Z2HMD1
LinkDB
All DBs
Position
complement(1164342..1166471)
Genome browser
AA seq
709 aa
AA seq
DB search
MKIEKLALPDSAIDFLKSQGYEKLYPPQADCVKSGLLDGKSILVSAPTASGKTLIAMLAM
LSYLSKNKGKVIYLSPLRALAAEKFTEFKKLEKISLGKKIKTSISTGDFEHIEKNLEKSN
ILILTNEKMDSIIRHGAEWIDDIGLVISDEVHLIGDESRGPTLEMILTHLKLLESKPQII
GLSATITNSNEIADWLDCKLVKNDWRPVPLSEGVCDGGKVTMSDGETFEVKPSLRGIPID
LGVQSVQNGGQSLVFAETRVRSKSLATKAADVISQLLVKKELTALEKTSKQILSENEHTE
IVKTLATLVKKGVAFHHAGLNQKCREIVEKEFRKGTIKLLSSTPTLAAGVNLPARRVVIS
NINRYNAKVGANRPISVLEYKQLCGRAGRPQYDKYGESIIVGNGNTEDLTEYYIHGESEP
IVSKITEDKSLRTHILSVIVTHPGIKKEELLEFFLQTLGGLQTTKATLSFAINISLRFLS
SQQLVIKKGERYAGTAFGKKTSMLYIDPLTATFFRDAIDNVSQQGKHTFGFLHIMTNCEE
FFPNFSLRNKDYESTSLMIENHSSELIEPISEYDCSRSLLALQMWITESTELSLSDTLGI
EAGDMHRMVENANWLSYCLREISKHIERSDLLEEFGDLRKRIVYGIREELLDLVRVKGIG
RVRARILFKHNIKNLDDLAKIPTHKLAEIDKIGLTIASNIKAELKKVRY
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagaaaaattagcacttccagattctgcaattgattttttaaagtctcaagga
tatgaaaaattatatccgccacaagctgattgtgtaaaatctggattgttagatggaaaa
agtattttggtttctgcacctactgcaagtggtaaaactttgattgctatgcttgcaatg
cttagttacctttctaaaaataagggaaaagtaatctatctgagtccattacgtgcttta
gctgctgaaaaatttacagaatttaaaaaattagaaaaaatttctcttggcaaaaaaatt
aaaacaagtatttcaactggggattttgaacatattgaaaaaaatttagaaaaaagtaat
attttgattttaacaaatgaaaaaatggattcaataattagacacggtgctgaatggatt
gatgatattggtttagtaatatctgatgaagttcatctaattggtgatgaaagtagagga
cctactctagaaatgattttaactcatctcaaattattagaatctaaacctcaaattata
ggtcttagtgcaacaattactaattcaaatgaaattgcagattggcttgattgtaaattg
gtaaaaaatgattggcgaccagttccattatctgaaggagtgtgtgatggtggaaaggtt
accatgagtgatggtgaaacatttgaagtgaaaccaagtttacgtggaattccaattgat
ttaggcgtgcaatctgttcaaaatgggggtcaatcattagtttttgcagaaactagggta
agatcaaaatcacttgcaacaaaagcagctgatgtaatttctcaacttttagtaaaaaag
gaattgactgcattagaaaaaacatcaaaacaaattctttcagaaaatgagcataccgaa
attgtaaaaactttagcaactcttgtcaaaaaaggagttgcatttcatcatgctggatta
aatcagaaatgcagagaaattgttgaaaaagaatttcgtaaaggaaccattaaactacta
tcatcaactccaacattagcagctggtgttaatcttcctgcaagaagagttgtaatttca
aacatcaatagatataatgcaaaagttggtgcaaatagaccaattagtgttttagaatat
aaacaactttgtggaagagctggaagaccacaatatgacaaatatggtgaatcaattatt
gttggaaatggtaacactgaagatttaactgaatactatattcatggtgaatcagaacct
atagtttcaaaaattactgaagataaatcacttaggactcatattctaagcgttattgtt
acacatcctggaataaaaaaagaagaattactagaattctttttacagacactaggtgga
ttacaaactacaaaagcaacactaagttttgcaattaatatttcattacgatttctttcc
agccaacagttagtaataaaaaaaggtgaaagatatgctggaactgcatttggaaaaaag
acttcgatgctttacattgatcctttaactgccacattttttagagatgcaattgataat
gtatctcaacaaggaaaacacacttttggatttttacatataatgacaaactgtgaagaa
ttttttcctaatttttctcttagaaataaagactatgagtcaactagtctgatgattgaa
aatcattcttcagaattaattgagcctatatctgaatacgattgttcaagaagtcttttg
gctctacaaatgtggattactgaatccactgaactttctttatctgatactcttggaatt
gaggctggagatatgcatagaatggtagaaaatgcaaattggctctcatattgtttaaga
gaaatctctaaacatattgaaagatctgatttacttgaagaatttggtgatttgagaaaa
cgaatagtttatggaattagagaggaattattagatttagtacgtgtgaaaggcattgga
agagttagggcacgaattttgtttaaacataatattaaaaatcttgatgatctcgcaaaa
attcctactcataaattagcagaaattgataaaattggtttaacaatagcaagtaacatt
aaagctgaattaaagaaggttagatattga
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