Candidatus Nitrosomarinus catalinensis: NMSP_1675
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Entry
NMSP_1675 CDS
T04846
Symbol
pcn
Name
(GenBank) DNA polymerase sliding clamp
KO
K04802
proliferating cell nuclear antigen
Organism
nct
Candidatus Nitrosomarinus catalinensis
Pathway
nct03030
DNA replication
nct03410
Base excision repair
nct03420
Nucleotide excision repair
nct03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NMSP_1675 (pcn)
03410 Base excision repair
NMSP_1675 (pcn)
03420 Nucleotide excision repair
NMSP_1675 (pcn)
03430 Mismatch repair
NMSP_1675 (pcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nct03032
]
NMSP_1675 (pcn)
03400 DNA repair and recombination proteins [BR:
nct03400
]
NMSP_1675 (pcn)
DNA replication proteins [BR:
nct03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
NMSP_1675 (pcn)
DNA repair and recombination proteins [BR:
nct03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
NMSP_1675 (pcn)
MMR (mismatch excision repair)
Other MMR factors
NMSP_1675 (pcn)
TLS (translesion DNA synthesis) factors
Other TLS factors
NMSP_1675 (pcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_N
PCNA_C
Receptor_2B4
Motif
Other DBs
NCBI-ProteinID:
ARS65273
UniProt:
A0A2Z2HMW6
LinkDB
All DBs
Position
complement(1326696..1327442)
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AA seq
248 aa
AA seq
DB search
MTFGAKTNGSDDLKAIISAISTLVEEATFVATAEGISFRGMDPSHVALIDISWPNSAFEK
YECDSDIKFGVRIDEFSKLIKRADKKDSIEISISEENMLLVTVGKNKKYKIRLIESSATD
TPLPKIPYDSKIILTSSKFDKILGDVQVVSDYLTINTSDSKGNFSGKGDSGEVIIDLDKD
ADDIEEISSKSDSEGTYSLEYLNPVVKAVGSNAGFITCEFSSAKPLRIEFKVANIGRIHF
YLAPRVES
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
ttgacttttggagctaaaacaaatggttcagatgatctaaaagctatcatctctgcaata
tccactttagttgaagaagcaacttttgttgcaacggcagaaggaatttcttttagaggg
atggatccatctcatgttgcattaattgatatatcttggccaaattcagcatttgagaaa
tatgaatgtgatagcgatattaaatttggagttaggatagatgaattttcaaaacttatc
aaacgtgcagataaaaaagacagtatagaaattagtatttctgaagaaaatatgttactt
gtaacagttggaaaaaataaaaaatacaaaattcgtctaattgaaagttctgcaactgac
acaccattaccaaaaattccatatgactcaaaaattattttaacttcatcaaaatttgat
aaaattcttggtgacgtacaagttgtttccgattatttaacaatcaatacgtctgattca
aaaggtaatttttctggaaagggagattctggtgaggtaataattgatcttgataaagat
gctgatgatattgaggaaatatcttcaaaatctgatagtgaaggtacttacagccttgaa
tatctgaatcctgtagttaaagccgtaggcagcaatgctggatttatcacatgtgaattt
tctagtgcaaaaccacttagaattgagtttaaagttgcaaatataggaagaatccacttt
tatcttgctccacgcgtggaaagttaa
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