Neptunomonas concharum: F0U83_01870
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Entry
F0U83_01870 CDS
T06194
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ncu
Neptunomonas concharum
Pathway
ncu00260
Glycine, serine and threonine metabolism
ncu00460
Cyanoamino acid metabolism
ncu00630
Glyoxylate and dicarboxylate metabolism
ncu00670
One carbon pool by folate
ncu00680
Methane metabolism
ncu01100
Metabolic pathways
ncu01110
Biosynthesis of secondary metabolites
ncu01120
Microbial metabolism in diverse environments
ncu01200
Carbon metabolism
ncu01230
Biosynthesis of amino acids
ncu01240
Biosynthesis of cofactors
ncu04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ncu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
F0U83_01870
09102 Energy metabolism
00680 Methane metabolism
F0U83_01870
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
F0U83_01870
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
F0U83_01870
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
F0U83_01870
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
F0U83_01870
Enzymes [BR:
ncu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
F0U83_01870
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
OKR_DC_1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
QEQ95550
UniProt:
A0A5P1R7C7
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All DBs
Position
405548..406804
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AA seq
418 aa
AA seq
DB search
MFSKDMSIADFDADLWSAMQSETTRQEEHIELIASENYTSPRVMEAQGSALTNKYAEGYP
NKRYYGGCEYVDVVEQLAIDRACELFGATYANVQPHSGSQANAAVYMALCKPGDTILGMS
LAHGGHLTHGAAVSFSGRIYNAVQYGLNPETGEIDYAEVERLAIEHKPKMIVAGFSAYSR
IVDWQRFRDIADQVGAYLFVDMAHIAGLVAAGVYPSPVAIADVVTTTTHKTLGGPRGGLI
LSARADEDLQKKLNFAVFPESQGGPLMHVIAAKAVCFKEAMEPEWKDYQAQVVKNAQAMA
ETFKSRGINIVSDGTDDHLFLMDLIDKEYSGKDADAALGRANITVNKNSVPNDPRSPFVT
SGLRIGTPAVTRRGFKEAEVTQLANWICDVLDDINNEATIEKVKSQVLDICARFPVYK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcaaagatatgtcaattgccgactttgatgctgatctgtggtcagccatgcag
tctgaaaccacgcgtcaggaagaacacatcgaactgatcgcttctgaaaactacaccagc
ccacgtgtaatggaagctcagggttctgcactgacaaacaaatacgctgaaggttatcct
aacaagcgctactacggtggttgcgagtatgttgatgttgtggaacaactggcgattgat
cgcgcttgtgaactatttggtgcaacttacgccaatgttcagccgcactcaggttctcag
gctaacgcagctgtttatatggcgctttgtaagccaggcgatacgattttaggtatgagt
ctggcacacggtggtcatttgactcacggcgcagcggtttccttttctggtcgaatttac
aatgctgtgcagtatggcttgaacccagaaacgggcgaaattgattacgcggaagttgaa
cgtctggcgattgagcacaagccaaaaatgattgttgcgggattctctgcttattctcga
attgttgactggcagcgttttcgtgatatcgccgatcaagtgggggcctacctgtttgtc
gatatggcgcacattgcaggtttggtggctgcgggtgtgtatccgtctccagttgcgatt
gcagatgttgtaacaacgacaacccacaaaacattaggcggcccacgcggtggtttgatc
ctgtctgctcgtgctgatgaagatctgcagaaaaagctaaactttgctgttttcccagaa
tcccaaggcggcccgttgatgcatgtaattgctgcaaaagcggtgtgtttcaaagaagcg
atggagcctgagtggaaagattaccaagcacaagtggtaaaaaatgcacaggcgatggct
gagacattcaagtcacgtggtatcaatatcgtatctgatggtacggatgatcacctgttc
ctgatggatctgatcgataaagagtacagcggtaaagatgcggatgcagcgttaggtcga
gcaaacattacggttaacaaaaactccgtgcctaacgatccacgttctccttttgtgacc
tctggtcttcgtatcggtacacctgcagtaacacgtcgtggctttaaagaagcggaagta
acgcagttggctaactggatttgtgatgtacttgatgacatcaataacgaagcaactatc
gaaaaagtaaaatcgcaggttcttgatatctgtgcacgtttcccggtttataaataa
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