Neptunomonas concharum: F0U83_03340
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Entry
F0U83_03340 CDS
T06194
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
ncu
Neptunomonas concharum
Pathway
ncu02020
Two-component system
ncu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ncu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
F0U83_03340
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
F0U83_03340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncu03021
]
F0U83_03340
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ncu02035
]
F0U83_03340
Transcription machinery [BR:
ncu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
F0U83_03340
Bacterial motility proteins [BR:
ncu02035
]
Flagellar system
Flagellar assembly proteins
Stator
F0U83_03340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_10
UPF0122
GerE
HTH_28
MarR_2
HTH_24
PhyR_sigma-like
HTH_5
CT_C_D
Motif
Other DBs
NCBI-ProteinID:
QEQ95815
UniProt:
A0A5P1R952
LinkDB
All DBs
Position
703730..704440
Genome browser
AA seq
236 aa
AA seq
DB search
MYNPQDKVSSHNLIEQYAPLVKRIAYHLMGRLPASVVLDDLIQAGMIGLLEAAKKYDASK
GASFETYAGIRIRGSIIDEVRRGDWTPRSVHRNGRRISEAIHKLEAELGRDASDSEIAAE
MDISVADYHSLLKDSLESRLFSFEELTSTEGETVGEQLSADDPGPVNLTESTAFAGALAS
AIDTLPEREKLVLALYYDEELNLKEIGEILGVSESRVSQIHSQAAHRLRGRLRDWQ
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacccgcaagataaagtttcaagccataatttaatagaacaatacgcgccgtta
gttaagcgtatagcctatcatttgatgggacggttaccagcgagtgtggttctggatgat
ctgattcaggcgggtatgattgggcttctagaagcagccaagaaatacgacgcgagtaaa
ggggctagctttgaaacctatgcgggtattcgtattcgagggtcaatcatcgatgaagtg
cgccgtggtgattggacgcctcgctccgttcacagaaatgggcgccgaatatctgaagct
atccataaattagaggctgaattaggtcgtgatgcttcagatagtgaaatcgctgccgaa
atggatatcagtgtggctgactatcatagcttactaaaagactccttagagagtcgatta
tttagctttgaagagctgacaagtacggaaggagaaaccgttggtgagcagctatctgct
gatgatccgggccctgtaaatttaacagaatcaacggcctttgccggagcattggcaagt
gctattgatacccttcctgaaagagagaagttggttttggcgctttactacgacgaagaa
ttaaaccttaaagagataggtgaaattcttggtgtaagtgagtccagagtgagccaaatt
cacagtcaagcagcccaccgtttacgcggacggcttagagattggcaataa
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