Neptunomonas concharum: F0U83_05995
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Entry
F0U83_05995 CDS
T06194
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ncu
Neptunomonas concharum
Brite
KEGG Orthology (KO) [BR:
ncu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncu03000
]
F0U83_05995
Transcription factors [BR:
ncu03000
]
Prokaryotic type
Helix-turn-helix
Other families
F0U83_05995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_2
AAA
DUF134
HTH_30
HTH_7
HTH_22
PAS_9
HTH_28
PAS
HTH_23
HTH_50
HTH_29
GAF_2
AAA_7
AAA_16
FIMAH
AAA_22
AAA_3
PAS_8
Motif
Other DBs
NCBI-ProteinID:
QEQ96293
UniProt:
A0A5P1R9L6
LinkDB
All DBs
Position
1270216..1272150
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AA seq
644 aa
AA seq
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MSYKLEQRVFSDPLQDAQRARERLLLEGEVPSGFLRAQIEASWQRSLKAGVRFQDPLITS
QPPMADLFELKENHQTLLSMAAPEMDHLSKQFNRDKGMVILANEKATILSVLGDKRSLNN
AGSYALDPGICWSEETHGTNALGTAVVDGKPVMINGTEHFLDGVTCFSCTSTPIKGVNGQ
LLGVLDLTTEANTQHIQGNMSAVQLAARSIENRLFISHFQEQAIIAFHSRTEYLRSAWQG
LIAIDMEGKILALNEQACQLLKKSREQLQHQPIEAITGQSPTVLLNQLLRNNGVTLQLRN
IVLHCELLHFPRQLTGFTSRREPLSRGTEKAKRSSDHPTIQKIGAEHPRLAKALRMALKG
INHDLPVLLNGETGTGKEVVARALHNQSRRCDKPFVAVNCAAIPEGLIESELFGYREGAF
TGSRKGGMVGRFQQANNGTLFLDEIGDMPLALQARLLRVLQERKVAPLGGGEEVDLDIAL
ICATHRDIKTLVKDNAFREDLYYRLNGVGVQLPALRVRSDLEALLSDLLTRVGASGVRIH
EEVLDMFRQYSWPGNIRQLEMVLKAAVAFLDEGEKEITIDHLTDDFIDELSANSHSGRAG
TIKVTELELIRNTLDQCEGNVSATAAALGISRATIYRKLREYDA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtataagttagagcaaagggtgtttagtgatcctcttcaagatgcacaacgggcc
cgcgaaagactcctgctcgaaggcgaagtacccagtgggttccttcgagcacaaatagag
gcttcatggcagcgaagccttaaagccggtgttcgatttcaagatccattgatcacctct
caaccgcctatggctgatctatttgaattaaaagagaatcatcaaacccttttgtcgatg
gctgcgcctgagatggaccacctatcaaagcagtttaatcgtgacaaagggatggtgatt
ctagctaatgaaaaagccacgatcctatcagtgttaggagataagcgttccctgaataat
gcggggagctatgcgctggatccgggtatatgttggtcagaagaaacccatggcaccaat
gcattaggtacagcggttgttgatggtaaacctgtcatgattaatggcactgagcacttt
ttagatggtgtcacctgtttctcttgtacatcaacacccatcaagggggttaacggccaa
ttattaggtgttctggacttaacgactgaagcaaatactcaacatatacagggaaacatg
agtgcggttcagttagccgccagaagtattgaaaaccgactgttcatttcccactttcaa
gaacaggccatcatcgcttttcacagccgcacagaatatctacgatccgcatggcaaggg
cttattgccattgatatggaaggaaaaattctggcgctcaatgaacaagcatgccagtta
cttaaaaaatcccgtgaacagcttcagcatcaaccaatagaggccatcacagggcagtct
ccaaccgttttgctcaatcaattgctgcgtaataatggggtgaccttacagttgcgaaat
atagttctgcactgtgagcttttacactttcctcgccagttgaccggttttacttccaga
cgtgagcccctaagtaggggaacagagaaggctaaacgctcatcggatcaccccacgata
cagaaaattggggctgagcaccctcgattagctaaagcattgcgcatggcattaaaaggg
attaatcatgatctacctgtgctcctgaatggggaaacaggcaccggcaaagaggttgtt
gcaagggctctgcataatcagagccgccgctgtgataagccgttcgttgcggtgaactgt
gcagccatccctgaggggttgatagaatcagaactgtttggatatcgtgaaggtgcgttt
accggctcaagaaaaggcggaatggttgggcgttttcaacaagcgaataatggcacatta
ttcctcgatgaaatcggcgacatgccactggccctacaggcacgattattacgagtatta
caggagcggaaagtagcgccgttaggtggaggtgaagaggtcgatcttgatatcgctttg
atctgtgccacccatcgtgatatcaaaacattggtcaaagacaatgcttttcgtgaagat
ctttactatcgcttaaatggtgtcggcgtacagttaccagcgttacgagtacggtcagac
cttgaagccctcttatctgatttattaactcgggttggcgcttcaggtgtacgtatacat
gaagaagtgcttgatatgttccggcagtacagttggccagggaatattcgtcaactagag
atggtactgaaagcagcggtagcctttttagatgaaggggaaaaagagatcacgattgat
catttaacggatgattttatagatgaactgagtgccaatagtcattcaggccgggcaggt
acgatcaaagtaacggagctagagcttattcgcaacacgctcgatcaatgtgaaggcaat
gtgtctgccaccgctgcggcattgggtataagccgagcgacgatttatcgtaagctacga
gaatatgatgcatag
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