Neptunomonas concharum: F0U83_08250
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Entry
F0U83_08250 CDS
T06194
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ncu
Neptunomonas concharum
Brite
KEGG Orthology (KO) [BR:
ncu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncu03400
]
F0U83_08250
DNA repair and recombination proteins [BR:
ncu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F0U83_08250
Archaeal homologous recombinant proteins
F0U83_08250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
KxDL
AAA_21
ABC_ATPase
GTP_EFTU
nSTAND3
AAA_16
cobW
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QEQ96707
UniProt:
A0A5P1RAT2
LinkDB
All DBs
Position
complement(1770563..1773622)
Genome browser
AA seq
1019 aa
AA seq
DB search
MQPLVLEMSAFGPFAAQEVIDFKRLGERPLFLINGPTGSGKTTLLDAICFALYGKTTGDE
REGAQMRSDLANAEQLTEVSFTFALSGQVFRVRRVPEQARPKSRGEGFTQQSAEAQLWQL
AEDGTELRLIVSNKVTEATREIEQLLGLNVDQFRQVMVLPQGKFRQLLMADSKDREHIFS
QLFQTQIYKKLEDELKIRSAEIRREADNLTRQKTVLLEQSGANGEESLVKNHLEIKEKTD
CSYKKLEECRHQENQTREYLRQSETLLARFAQLDELRKSILILAEQSHSIEADKLRLQRA
SVASQLQPAYDQYLQTQQRLSQAERQLTQAEELLNAKKTQQALLAEETQKIPHLQQQINE
WGAQKQEVARYLEKSKQLQGVEKARLQAQQACQAKRQQNAVANAELDHKKAELVKLDESL
AQLRFNIEENGDLPIAVDRAKQQVEQAKRLQEAQIKSAELTQKLATLKQTGIALNEREQA
ALSDANRIERDWHLGQAAILSRSLQSGQPCPVCGSDNHPSPAVSEIEPPSQNDVAQARDK
AAELTQELSLKREAYSLTNKDLENITNVITEVKALLGDEENLSVDALEQRYLEIKRQCDI
WMEQRASLKGLESKKAELSASIAQLEQRLAHHKAEFDHADKMLTEIEKEYALVVAELPEA
YRQSDAVQKALTSLEAQMVTADDQVKSLQKRQSAMQSALDEATATQRIRKESCEALKVEF
EHQLSSWLSALSNSVFNDQTDFLSAILDSEQQHQVQERIQRYESDRLKKQGALTAIESEL
KNQTPPDMATVEAVWHAAKLQLEQAEQQWRALHNQQIVLEEKLKGLEQIKRETEALQQQY
AVAGTLSDVANGQTGNKVSLQRFVLSVLLDDVLIEASHRLSLMSKGRYRLLRKEDRAKGN
RASGLDLEVEDAYAGRIRAVATLSGGESFMAALALALGLSDVVQAYAGGIRLDTLFIDEG
FGSLDPESLDLAIRTLTDLQQSGRMIGIISHVTELKEQIPLRIDILSSERGSRICWRDS
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgttagtgttagaaatgagcgcttttggcccctttgctgcacaagaggtcatc
gactttaaacgtttaggtgagcggccgctctttctcatcaatggcccgactgggtcagga
aaaaccaccttactggatgccatctgctttgccttatacggtaagaccacaggtgatgag
agagaaggggcgcagatgcgttctgatcttgctaatgctgagcaactcacagaagtaagc
tttacctttgcgctttctggacaagtatttcgagttcgtcgtgtgcctgagcaggcacgg
ccaaaatcccgaggtgagggatttacccagcaatcggctgaagcgcagttatggcaacta
gcagaagatggaacagagctgcgcttgattgtaagtaataaagtgaccgaggccacgcga
gagattgaacaactgcttggattgaatgtggatcagtttcgccaggtaatggtgttacct
caaggcaaatttcgccagcttttaatggccgactcaaaagatcgcgagcatatttttagt
cagctttttcagacacaaatctacaaaaaacttgaagatgagctaaaaatacgttcagca
gagatacgccgcgaagccgataatttaactcgccaaaagacagtactgttagagcaaagt
ggtgctaatggagaggaatctctagtaaaaaatcatttagaaatcaaagaaaaaactgat
tgttcttataagaaacttgaagaatgtcgccatcaggaaaatcagacaagagagtactta
cgccaatctgaaactttgcttgcgcgctttgctcagctggatgagctaagaaaatcaatc
ctaatattggcggagcaatctcactcgattgaagccgataaattacgcttacagcgagcc
agcgtagccagccaactccaacctgcttatgatcagtatctgcaaacgcagcagcgttta
tcgcaagcagaacgtcagttaacgcaggccgaagagctgttgaacgccaagaaaacacag
caagcgctgttagccgaagagacgcaaaaaataccccacttacaacagcaaataaatgag
tggggtgcacaaaagcaagaggttgctcgttaccttgaaaaatcaaagcaacttcaagga
gtagagaaagccaggcttcaggcccaacaagcttgccaagctaagcggcagcagaacgca
gtagccaatgctgagttggatcataagaaggcggaactggtgaagttggacgaaagcttg
gctcagctccgcttcaatattgaggaaaacggcgacctacccattgctgtggatcgcgct
aaacagcaggtcgagcaggcgaaacgcttacaagaggcacaaatcaaatctgctgagcta
acgcaaaaattagccactttaaagcaaacaggcattgcgctaaatgaacgagagcaagcc
gctttgtcggatgctaatcgtatagagcgggattggcatctggggcaggctgcgattttg
tcacgaagtttacagtcaggtcagccttgccctgtgtgcggtagcgataaccacccatca
cccgctgtcagcgagatagagccgccaagccaaaatgatgttgctcaagcgagagataag
gctgctgagctgactcaggagttgagcctaaagcgcgaagcatactccttaactaacaaa
gacttggaaaatattactaatgtaataaccgaagtcaaagctctgctgggtgacgaagag
aatctaagtgtagatgcactggaacagcggtatcttgagataaagcgacagtgtgatatt
tggatggagcagcgcgcatctcttaaaggacttgagagcaaaaaagccgaacttagcgca
tcaattgctcaattagaacagcgtttagcgcaccacaaggctgaatttgatcatgccgac
aaaatgctaactgaaatagaaaaggaatatgcattagtcgtagctgagctaccagaagct
taccgacagagtgacgcggttcagaaagcgttaacaagtctggaagcgcagatggtcacg
gcagatgaccaagttaagtcactgcaaaaacgccaaagcgccatgcaaagcgcactggat
gaagcaactgcgacgcaacgtataagaaaagaatcttgtgaagcattaaaggtggaattt
gaacaccagctatcgagttggctatcggctttatcgaacagtgtttttaatgatcaaacc
gactttttgagtgctattttagattcggaacagcagcatcaagttcaggagcgcattcag
cgctacgagtctgacaggctaaagaagcagggggctttgaccgccattgagtctgaatta
aagaaccaaacaccgcctgatatggccaccgtagaagcggtatggcatgccgctaaattg
cagcttgagcaagcagagcaacaatggcgagccttacataatcagcaaattgttctagag
gaaaaactcaaagggcttgagcaaattaaacgggagaccgaggccttacagcaacaatat
gccgttgcaggcacactgagtgatgtagctaatgggcaaacaggaaataaagtcagtttg
cagcgctttgtgttgagtgttctattggatgatgtactcattgaggcgagccatcgctta
tcgctgatgagtaaagggcgttatcgactgctgcgcaaagaggatcgcgccaaaggaaat
cgcgcctctggtttagatctagaagttgaagatgcatacgcggggcgcattcgagccgtt
gcgacattatctggcggtgaaagttttatggcggcgctggcgctggcgcttgggctctca
gatgttgtgcaggcttatgccggaggcattcgtttagatacgctttttatcgatgaaggt
ttcggcagtctagaccctgaatcgcttgatttggctattcgtacattgaccgatctgcaa
caaagtggccgtatgataggaattatctcccacgttaccgagcttaaagaacagataccg
ctccgaattgatattctctcatcggagcgggggagtcgaatctgctggcgcgactcctaa
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