Neptunomonas concharum: F0U83_09340
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Entry
F0U83_09340 CDS
T06194
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
ncu
Neptunomonas concharum
Brite
KEGG Orthology (KO) [BR:
ncu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncu03400
]
F0U83_09340
DNA repair and recombination proteins [BR:
ncu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
F0U83_09340
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
SLFN-g3_helicase
AAA_22
AAA
AAA_30
TniB
T1R_D3-like
AAA_16
DZR
Motif
Other DBs
NCBI-ProteinID:
QEQ96906
UniProt:
A0A5P1RCA5
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Position
2001850..2003592
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AA seq
580 aa
AA seq
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MTTYTLRPYQQEAVERTLQHFRKTTEPAVIVLPTGAGKSLVIAELARLAKGKIMILAHVK
ELVEQNHEKFIALGREAGIYSAGLKRKQTNYQITFASVQSISRNLDSLIDPYSLLIIDEC
HRLSEDEDSQYQKTIAHLRSLDPDLRILGLTATPYRLGLGWIYQYHYHGYIRSEDSKPFK
FCIYELPLRYMISKGYLTPPRLEDAAIAQYDFSAITPDRFGQLPEKPVNELLTRCKRVTN
SICQQIEALSEHRKGVMIFAATVKHAHEVLSYLPSQSSALITGETPPEQRDQLIRDFKSQ
HIKYLINVSVLTTGFDAPHVDMIAILRPTESVSLYQQIAGRGLRLSPNKTDCLIVDYAGN
QFNLFHPEVGTTKPNPDSEPVMVFCPSCEFGNTFWGKKDTDGNVIEHYGRRCQATHLSEQ
GEPIQCDYRFRFKNCPFCNAENDIAARNCHQCHEAIIDPDDQLKKALQLKDALVMRCAGI
SIEIKESRVTVIYHDEQGETLQERFDFASPGQRQKFNQLFGRRFQHASKPIQFKKAREVE
QLAHHLTSPDFVIARKKGKFWQISERIFDYEGKYRKAHQL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttatacattgcgcccttatcaacaggaagccgttgagcgcacactacagcat
tttagaaaaacaaccgagcctgcggttattgttctacctacgggagcaggtaaaagcctc
gttattgctgagctagcgcgcttagcaaagggtaaaatcatgatactggcacacgttaaa
gagctggttgagcaaaaccatgaaaagtttatcgcgctcggtcgtgaggctggcatatac
tctgccggactaaaacgtaagcaaaccaattaccaaataactttcgccagcgtccaatct
atctcccgtaacttagactccttgatagatccctacagcctcttgatcatcgacgaatgc
catcgactcagtgaggacgaagatagtcaataccaaaagaccatcgctcatttaagatca
cttgatcctgatttacgcatccttggactgactgcaacaccttatcgactcgggctagga
tggatttatcaataccattaccatggttatattcgcagtgaagacagcaagccgttcaaa
ttttgcatttacgagctaccgttaagatatatgatctccaaaggttatctcactcctcca
cggttagaagatgccgctattgcacaatatgacttttccgctattacccctgaccgcttc
ggtcaactccccgagaagcccgtcaatgaattactcacccggtgtaagcgcgtcactaac
tcaatctgccagcaaattgaagcgctatcagagcaccgaaaaggcgttatgatcttcgca
gctacggttaagcacgcacatgaagttctgagttacctcccttcacagagcagtgcgctg
atcacaggtgagacgccccctgaacagcgggatcagctgatccgcgattttaagtcgcag
cacatcaagtaccttatcaatgtgtctgtattgactaccgggtttgatgcacctcatgtt
gatatgattgccatacttagaccaactgaatcggtgagcttatatcagcaaattgcaggc
cgcggactcagattaagtcctaataagaccgattgcctgatcgttgattatgcaggtaat
caatttaatctgttccacccagaagtgggaacaaccaaacccaatccagactctgagccc
gtaatggttttttgcccttcctgcgagtttggcaacaccttttggggtaaaaaagacacc
gacggtaacgtcattgaacattatgggcgacggtgccaagctactcacctttctgaacaa
ggagagcctatccaatgtgattatcgctttcgattcaaaaactgcccgttttgtaatgcc
gagaatgatattgcagccagaaactgccatcaatgccatgaagcaatcattgaccccgat
gaccagcttaaaaaagcactccaactcaaagacgctctcgtaatgcgctgtgctggcatt
agcatagagattaaagagtcacgggttactgtgatctaccatgatgagcaaggcgaaact
ttacaggaacgttttgactttgcttcccccggacaacgccaaaagtttaatcaattattc
ggaagacgctttcagcatgccagcaagccaatacagtttaaaaaggcacgcgaagttgaa
cagctcgcgcatcatctgacttccccagatttcgttattgcacgcaaaaaagggaaattc
tggcaaatcagcgaacgtatttttgactatgaaggaaaatatagaaaggcccatcaactg
taa
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