Neptunomonas concharum: F0U83_10370
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Entry
F0U83_10370 CDS
T06194
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ncu
Neptunomonas concharum
Brite
KEGG Orthology (KO) [BR:
ncu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncu03021
]
F0U83_10370 (rapA)
Transcription machinery [BR:
ncu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
F0U83_10370 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
Motif
Other DBs
NCBI-ProteinID:
QEQ97083
UniProt:
A0A5P1RBV4
LinkDB
All DBs
Position
2201939..2204806
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AA seq
955 aa
AA seq
DB search
MAVTEFIPGQRWISNTEAELGLGIITSNLDRRVTILFPAAEEERTYATDNAPVSRVEYPV
GESVQTAEGVEFEITERLEKNGCIIYFGKDKEGNELIVPELELDSTVQFNRPQDRLFAGQ
IDKLSRYRLRLDTLEHHHRLQKSPAYGLSGGRVQLLPHQFYIAHEVANRFAPRVLLADEV
GLGKTIEAGLILHQQLISGRAQRVLITVPDSLVYQWLIEMLRRFNLRFSIMDELRCTAME
MSGTDNPFESAQLILCTQSFINDNAERIEQILACQWDMLIVDEAHHLVWSETETSPLYRT
IETLASNIPSLLLLTATPEQLGIESHFARLRLLDPDRYSDLDQFREEQTHYAEVNTLVQK
LIAENGVSLLANDAALQAELNGYLGEETSAALIESAQSGEGDIALEECINHLLDRHGTGR
VLFRNTRDAVEGFPKRVLHTYPLEAPLQLMTDTAEATLQQVLQPEYLIGEDWLEQDPRVA
WLDNWLKDHRLEKTLLICASADSAQALEEYIRLRKGVRSAVFHEKMTLINRDRAAAYFAD
EEEYAQVLVCSEIGSEGRNFQFAQHLIMFDLPLNPDLLEQRIGRLDRIGQKHDVQIHVPY
YENSAQAILLRWLDEGINAFRHTCPAGQLLLNQFEDTLTSLLLDGADEAVFQELITTSQA
ASKEILDELKKGRDRLLEMSSCRPAQAEALLEAVTEYEQRSQLVDYMERVFDQFGVDQQT
HGLHSVILQPTDQMIYHRFPGLSDDGCTATYSREEALGREDMQFLNWEHPMVSGAMEMIT
GSEFGNTAVCTVKLPPLQPGTLLVETIFVLYCAAPRALNLQRYQPQATVRVLFDSNGNNL
TQIITSEHLNKLGERVKRHASQNLIRHGREQISSVLEKAETAAEQQQDTLIAAALDKATH
QLDEEVERLQALIKVNPSIREDELSQLLANRESILNHLRTSKLKMDAVRIAVVSN
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
ttggcagttacagagtttattccaggtcaacgctggatcagcaataccgaagccgagtta
ggcctaggtatcattacatccaacctagaccgacgcgttaccatcctatttcccgccgca
gaagaggagcgtacttacgccaccgacaacgctccagtgagccgagtggagtaccccgtt
ggcgaatccgtccaaacagctgaaggtgttgagttcgagatcacagaacgtctcgaaaaa
aatggatgtattatctatttcggtaaggataaagagggcaacgagctcattgttcctgag
ttagaattagacagcactgtccaatttaaccgcccgcaagatcgcctatttgcaggacaa
atagacaaactaagccgttaccgcttgcgtttggatacccttgagcaccatcatcgcctg
cagaaatcaccggcctacggtctatcaggtggtcgtgtgcaattgttacctcatcagttt
tacatcgctcatgaagtcgcaaatcgttttgcgccaagggtattacttgctgacgaagta
ggcttgggtaaaaccatagaagccggtctcatactccaccagcaactcatcagcggccgc
gcacaacgcgtgttaattaccgtacctgatagcttggtttatcagtggttaattgagatg
cttcgccggtttaatctgcgctttagcattatggatgagcttcgctgcaccgctatggag
atgtcaggaacagacaatccgttcgaatcagcgcaactgatcctctgcacccagtcgttc
atcaacgataacgccgaacggatagaacagattttagcctgccagtgggatatgctgatt
gtcgacgaagctcaccaccttgtgtggagcgaaaccgaaaccagcccgctttatagaaca
attgagacactggcaagcaacatccccagtttgttgcttctgacagccacccctgagcag
ctaggcattgaaagtcattttgcccgcttacgcttgctcgatcctgatcgttattcagat
ttagaccaattccgtgaagaacagactcactacgctgaagtcaacacactggttcaaaag
ctcatcgctgagaatggcgtatccctgctcgctaatgacgcggcacttcaagctgagctg
aatggttacttgggtgaagaaacctcagcagccttgattgagtcagctcaatctggtgaa
ggagatatcgcccttgaagaatgcattaaccacctcttagatcggcacggaacaggacgc
gtactcttcagaaataccagagatgcagtagaaggcttcccaaaacgcgtacttcatacc
taccctctcgaagcccccctgcagttaatgacagatactgccgaagcgaccctgcaacag
gtactccaaccagagtacttgattggggaagattggctagaacaggacccaagagtcgct
tggctggacaattggctcaaagatcatcgtttagagaaaaccttactgatctgtgccagc
gcagatagcgcacaagcgttggaggagtatatccggctacgtaaaggcgttcgctctgcc
gttttccatgagaagatgacactcatcaatcgtgaccgagctgcggcttattttgccgac
gaagaggaatacgcacaggtgctggtgtgctctgaaattggtagcgaagggcgtaacttc
cagtttgcacaacacctcattatgttcgacctacctctaaaccccgacctgttagagcag
cgtatcggccgtttagaccgtatcggccaaaaacatgatgtgcagattcatgtcccctac
tacgaaaacagtgcccaagcgattctgctacgctggctggatgaaggcatcaacgctttt
cgtcatacctgccctgctggccaattgctcctaaatcaatttgaagacacgctgacttcc
ctgctgctcgatggcgcggatgaggctgtatttcaggaattgatcacaacatcccaagct
gcctctaaagagattctcgacgaactcaaaaagggacgagatcgcctgcttgagatgagc
tcttgtcgcccagctcaggcagaggcactgttggaagctgttaccgagtatgagcaacgt
agccagctggttgattacatggaacgggtattcgaccaattcggcgtagatcaacaaact
catggtctacactcggttattctacagccaaccgatcagatgatttatcaccgcttcccg
gggctctcggatgatggctgcacggcgacctattccagagaggaggcgcttggccgcgag
gacatgcaattcttaaactgggaacacccaatggtttctggggcaatggagatgattaca
ggcagtgagtttggtaacacggctgtctgcaccgttaaactcccgccactacagccaggc
actttattggttgagactattttcgtcctctattgtgcagctccccgtgcgcttaacctg
cagcgttatcaacctcaagcgacggttcgcgtactgtttgatagcaacggtaataatctg
actcagattattacctcagagcacctgaacaaacttggcgagcgcgtcaaacgtcatgcg
tcccaaaatttgatacgtcatggccgcgaacagatctccagtgttttggaaaaagccgag
acagccgccgagcagcagcaggataccctcatagccgctgcgttggacaaagcaacacat
cagcttgatgaagaggtagaacgtcttcaagcactgattaaagtcaatccttcaattcgt
gaagatgaactatcgcagttactggctaatcgtgagagtatcttaaatcacttacgcaca
tctaaattaaaaatggatgccgtacgtatcgcagtggtgagtaattag
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