Neptunomonas concharum: F0U83_14305
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Entry
F0U83_14305 CDS
T06194
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ncu
Neptunomonas concharum
Pathway
ncu00061
Fatty acid biosynthesis
ncu00071
Fatty acid degradation
ncu01100
Metabolic pathways
ncu01212
Fatty acid metabolism
ncu02024
Quorum sensing
ncu04146
Peroxisome
Module
ncu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ncu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
F0U83_14305
00071 Fatty acid degradation
F0U83_14305
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
F0U83_14305
09145 Cellular community - prokaryotes
02024 Quorum sensing
F0U83_14305
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ncu01004
]
F0U83_14305
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncu04147
]
F0U83_14305
Enzymes [BR:
ncu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
F0U83_14305
Lipid biosynthesis proteins [BR:
ncu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
F0U83_14305
Exosome [BR:
ncu04147
]
Exosomal proteins
Exosomal proteins of breast milk
F0U83_14305
Exosomal proteins of breast cancer cells
F0U83_14305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QEQ97798
UniProt:
A0A5P1RDU2
LinkDB
All DBs
Position
complement(3014775..3016436)
Genome browser
AA seq
553 aa
AA seq
DB search
MDHPRGTWIPDELNPHGYQTVLDVVARHCRVYADKPAFTSFGRTLSYGELDQLADAFAVY
LQKETDLKPGDRLAIQLPNLIQYPVVLFGALRAGLVVVNTNPLYTPRELEHQFKDSGAKA
LVIHASMAHNAERIIDKTDVKHIFVTQVGDLHGFLKRTLLNTAIKYIKKMEPDYNLPMEK
SLRQALMAYMGEKPAPVSVRTEDTAVLQYTGGTTGVSKGAVLTHGNLVSNMLQGSELISR
AEAGWAETAISPLPLYHIYAFTLSLIIMEEGGHSVLIANPRDIAGFIKELKRWNMSGFMG
LNTLFVALCNQESFRALDFSNMKITISGGMALTHAAANQWKEVTGCEIMEGYGLTETSPA
VAINPPGEVSIGTIGWPLKATDVRIIDTTGEEAPIGTPGELCVKGPQVMKGYWQRERETN
ACFTDDGYLITGDVAVQEEDGRLRIVDRAKDLIIVSGFNVYPNEIEDVVTSHPGVMECAA
IGIKDERSGEVPKLFVVRKDAELTEKEIIKWCKEHLTNYKVPKTVTFVEDLPKSNVGKVL
RRMLKDDDTSHAA
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggatcacccgcgcgggacttggatcccagatgaactgaatcctcatggctaccagacc
gtacttgatgttgtcgcaagacattgtcgggtttatgcagacaaacccgcatttaccagc
tttgggaggacgctctcctatggtgaactggaccagttagcggacgcgtttgcagtttat
ctacaaaaagaaacggatcttaaacccggagaccgtttggcgattcaactacctaacctg
atccaatatccggttgttctgtttggcgctttgcgagcgggactagtggttgtgaacacc
aacccgctttataccccgcgggagctagaacaccagtttaaagactccggtgccaaagcg
ttagtgatacacgcaagtatggcgcacaatgctgagcgtattattgataaaactgacgtt
aaacatatttttgtgactcaggttggagacttgcatgggttcttaaaacgcaccctgctc
aatacggccattaaatacatcaagaagatggaacctgactacaatctccccatggagaaa
tcgctacgccaagcgttgatggcatatatgggagagaaaccagcaccggtaagcgtacgt
acagaagataccgcagtactgcaatataccggaggtacgaccggcgtttctaaaggtgcc
gtattgacgcacggtaatttggtctccaacatgctccaaggaagcgagcttatcagccgc
gctgaagcaggctgggcagagacggccatttcgccgctaccgctttatcatatctatgcc
ttcaccctctcgctaatcattatggaagagggcggtcacagtgtgttgatcgcaaatcca
cgggatattgccggttttataaaagaacttaagcgttggaatatgtctggattcatgggg
cttaatacgctttttgtcgcactgtgcaaccaagaaagtttccgtgcgctcgattttagc
aacatgaaaatcaccatctctggaggcatggcgctaacccatgcagccgctaaccaatgg
aaagaggtgacaggttgcgaaattatggaaggttacggactaacagagacctcgccggct
gtggccatcaacccgcccggcgaagtatccataggaaccattggttggccactcaaagca
acggatgtgcgtattattgataccacaggagaggaggcgccgattggcacaccaggtgag
ctgtgcgtgaaaggtccgcaggtcatgaaaggctactggcagcgagagcgcgaaacgaac
gcctgttttacagatgatggttatctcattaccggggatgtagctgttcaggaggaagat
ggtcggctacgtattgttgatcgcgctaaagacttgatcattgtctccgggttcaacgtc
tatccgaacgagattgaagacgttgtgacctcccatccaggtgtgatggagtgtgctgcg
attggtatcaaagatgagcgcagtggtgaagtgccgaagttatttgttgtgcgaaaagat
gctgagcttaccgaaaaagagatcatcaagtggtgtaaagaacatttgaccaattacaaa
gtgccgaagaccgtcacctttgttgaagatctacctaaatccaatgtaggcaaagtgcta
agacgtatgttgaaagatgatgatacgtcacatgcggcatga
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