Candidatus Nitrosocaldus cavascurensis: NCAV_0117
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Entry
NCAV_0117 CDS
T05329
Name
(GenBank) Glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
ncv
Candidatus Nitrosocaldus cavascurensis
Pathway
ncv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ncv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NCAV_0117
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ncv01007
]
NCAV_0117
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncv03016
]
NCAV_0117
03029 Mitochondrial biogenesis [BR:
ncv03029
]
NCAV_0117
Enzymes [BR:
ncv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
NCAV_0117
Amino acid related enzymes [BR:
ncv01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
NCAV_0117
Transfer RNA biogenesis [BR:
ncv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
NCAV_0117
Mitochondrial biogenesis [BR:
ncv03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
NCAV_0117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
Mut7-C
Pou
Motif
Other DBs
NCBI-ProteinID:
SPC33317
UniProt:
A0A2K5ANV8
LinkDB
All DBs
Position
NCAV:complement(105995..107467)
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AA seq
490 aa
AA seq
DB search
MNYDAVTELALSRGFYFPSCEIYADAQAGFWEYGPLGVALKNRYIELWRRELVRRDGMLE
IDGSQIMSKSVFIASGHLDSFNDPIVRCMKCSSVYRADRLVGEVINTVVPERIGDEELYT
LIQKHNIRCPKCNGELSKVSRFNMMFKVSIGADGSEAYLRPETCQSIFVDFARLFKVMRC
KLPIAIAQVGKSFRNEIAPRQSLIRLREFYQAEIEVFCNPKRLDEIDRFDEVKDVMLRIQ
DSNGMHEVTASSAVSRGIIPNRLIAYYLALLNEFYSKTGIDMGRTRFRRLADDEKAFYAT
VAYDFEVETSLGWLELVACNYRSDHDLKGHMQVSKENMEVMDADDGSGNSKVLPHVFELS
MGVERSLYCILEHSLYEDMENDRLVLRLKPYLAPIQVGVLPIVKKDEVEAKAKEVFKMLR
KDIDAFYDDSGSIGRRYRRLDEIGTPYAITIDRQTLDDGTVTIRDRDTMQQVRVRIDDLK
DELLRRLKMP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaactacgatgcagtaacagagctagcattgagtagagggttctacttccctagttgc
gagatatacgctgatgcgcaagcaggattctgggagtatgggcctttaggcgttgctctc
aagaataggtacatagagttgtggaggagggagttggttaggagggatggtatgcttgag
atagatggtagccagataatgagcaagagcgtcttcatagcctcaggtcatcttgatagc
ttcaatgatcccatagttagatgcatgaaatgctcatctgtgtacagggctgataggctt
gttggcgaggttataaacactgtagtgcccgaaaggattggagatgaggagttgtatact
ctaatccagaagcataacataagatgccctaaatgcaacggtgagttgagcaaggttagt
aggttcaacatgatgttcaaggtaagcataggggctgatggttctgaagcataccttaga
ccagagacatgccagagcatattcgttgactttgctaggctcttcaaggtcatgcgctgc
aagttaccaatagcaattgctcaagtaggcaagagctttaggaatgagattgctcctagg
cagagcctcataaggttaagggagttctatcaggcagagatagaggtattctgtaaccct
aaaaggttggatgagatagataggtttgatgaagtgaaggatgttatgcttaggatacaa
gatagcaatggtatgcatgaggttacagcatcctctgcagtaagcagaggcatcatccca
aataggcttatagcatattaccttgccctactgaatgagttctacagcaagactggtata
gatatgggtagaacaaggttcaggaggcttgctgatgatgagaaggcattctatgctaca
gttgcttatgactttgaggttgagacaagccttggttggttagaacttgtagcatgcaac
tatagatctgatcatgatctgaaagggcatatgcaggttagcaaggagaatatggaggtt
atggatgctgatgatggtagtggtaacagtaaagtgctcccccatgtattcgaactatcc
atgggggtagagaggagcctctactgtatactagagcattcattgtatgaggatatggag
aatgataggcttgtgttaagactcaaaccctatctagcccctatacaggttggggtattg
cctatagttaagaaggatgaggtagaagcaaaggccaaggaggtattcaagatgctgagg
aaggatattgatgcattctatgatgactctggctctatagggagaaggtatagaaggttg
gatgagataggtacgccatatgcaataacaatagatagacagacgctagatgatggtaca
gtaacgataagggatagggatacaatgcagcaggttagggtaaggatagatgatcttaag
gatgaactcttaagaaggcttaagatgccttaa
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