Candidatus Nitrosocaldus cavascurensis: NCAV_0235
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Entry
NCAV_0235 CDS
T05329
Name
(GenBank) putative Transcriptional regulator TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
ncv
Candidatus Nitrosocaldus cavascurensis
Brite
KEGG Orthology (KO) [BR:
ncv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncv03000
]
NCAV_0235
Transcription factors [BR:
ncv03000
]
Prokaryotic type
Helix-turn-helix
Other families
NCAV_0235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
Regulator_TrmB
HTH_IclR
wHTH-PRTase_assc
HTH_24
HTH_Crp_2
MarR_2
NirdL-like_HTH
HTH_47
Motif
Other DBs
NCBI-ProteinID:
SPC33433
UniProt:
A0A2K5AP61
LinkDB
All DBs
Position
NCAV:223667..224476
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AA seq
269 aa
AA seq
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MMTGMFMLFNNDEYKEPIERIIRVLLDLGLTLNEAKVYVYLAKTGYRKAIEIAENIGIPR
TETYQILNRLQSRGLVIATMEHPVRYAAVEFNDLLKTMINVSMERLKEFDRRREEILQVW
NNLPEFAKTSCDDKDRFQILEGRDNVYARISSMVADAGELLMICNEVDALRMYNYGIIDV
IAKCSNVKIISSVSPSMASVFMDVGLSNVRRIESKFPLVIIKDRKEMVHVIRERNKNDTA
AIWTDSTALIESILALFSMLWKDVDDSKQ
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaggcatgttcatgctcttcaacaacgatgaatacaaggagcctatagagagg
ataatcagggtgctgttggatctaggcttaacgcttaacgaggctaaggtgtatgtgtac
cttgcaaagactggctacaggaaggctatagagatagcagagaatataggcataccaagg
actgagacgtatcagatacttaataggttgcagagcagagggcttgttatagcaacgatg
gagcatccagtgagatatgcagcagttgagtttaacgatctgttgaagactatgataaat
gtaagcatggaacgccttaaggagttcgataggaggagggaggagatactacaggtatgg
aacaacctaccagagtttgcaaagacctcatgcgatgataaggataggttccagatactt
gaaggtagggataatgtatacgcaaggataagcagtatggttgctgatgcaggtgaactg
ctcatgatatgcaatgaggttgatgccctaaggatgtacaactatggcataattgatgta
atagcaaagtgcagcaatgtaaagataataagtagtgtatccccaagcatggcatctgta
ttcatggatgtaggcttgagtaatgtaaggaggatagagagcaagttcccattggtgatt
ataaaggataggaaggagatggtccatgttattagggagaggaataagaatgatacagca
gcgatatggacagattcaacagcactaatagagtctatactagcactcttctcaatgcta
tggaaggatgtagatgatagtaagcagtag
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