Candidatus Nitrosocaldus cavascurensis: NCAV_0495
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Entry
NCAV_0495 CDS
T05329
Name
(GenBank) Endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ncv
Candidatus Nitrosocaldus cavascurensis
Pathway
ncv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ncv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCAV_0495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncv03400
]
NCAV_0495
Enzymes [BR:
ncv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
NCAV_0495
DNA repair and recombination proteins [BR:
ncv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NCAV_0495
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
UvdE
Radical_SAM
Amidohydro_1
Motif
Other DBs
NCBI-ProteinID:
SPC33688
UniProt:
A0A2K5APU9
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All DBs
Position
NCAV:440342..441169
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AA seq
275 aa
AA seq
DB search
MRIYIGTQGLPATARGHGIEAGLRRLHELGLNALEVDFAHGIYLSMEESRDLGRLADELG
IRLSIHAPYYINLCSEDEEVIRRSKHRILECVERGEVMHADTIAIHSAFYGKRSKEEAYA
MVRAGYESIVDEMRSMGIKHVRLGAETMARRNQFGTLDEVLRLYKDLNGWVRPYVDFAHI
FARNDGRIDYADVIDRLLNAGLEYINAHFTGLARKGYRYVDVHRPIGEPQFEPLALEIVR
RRLDITIICESPLLELDCLRMRNILEFMSMELSLD
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgaggatatatatagggactcaaggcttgccagccactgctagaggtcatggtatagag
gctggcctgaggaggcttcacgagcttgggctcaatgctcttgaggttgactttgcccat
ggcatatatcttagcatggaggagagtagagatcttggaaggttagcagatgaactgggt
ataaggttatccatacatgcaccttactacataaacctatgttcagaggatgaggaggtg
ataaggagatccaagcataggatactagagtgtgtagagagaggtgaggttatgcatgct
gatacaatagcaatacattcagccttttatgggaagaggagcaaggaagaggcatatgct
atggttagagcaggttatgagtctatagtggatgagatgaggagtatgggtataaagcat
gttagacttggtgcagagacaatggcaaggaggaaccagtttggtactcttgatgaggtg
cttagactctacaaggatcttaatggctgggtaaggccttatgttgactttgcacatata
tttgctaggaacgatggtaggatagactatgcagatgttatagatagactgctcaatgct
gggttagagtatataaatgcgcactttacagggcttgcaaggaaaggctatagatatgtt
gatgttcatagaccaataggggaaccacagttcgaacctttagcgttagagatagttagg
aggaggctcgatataaccataatatgtgaatcccccctgcttgagcttgattgcttaagg
atgaggaatatactggagttcatgagcatggagttaagccttgattaa
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