Candidatus Nitrosocaldus cavascurensis: NCAV_0525
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Entry
NCAV_0525 CDS
T05329
Symbol
sdhB
Name
(GenBank) FeS-center protein of succinate dehydrogenase/fumarate reductase
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
ncv
Candidatus Nitrosocaldus cavascurensis
Pathway
ncv00020
Citrate cycle (TCA cycle)
ncv00190
Oxidative phosphorylation
ncv00650
Butanoate metabolism
ncv00720
Other carbon fixation pathways
ncv01100
Metabolic pathways
ncv01110
Biosynthesis of secondary metabolites
ncv01120
Microbial metabolism in diverse environments
ncv01200
Carbon metabolism
Module
ncv_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ncv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NCAV_0525 (sdhB)
00650 Butanoate metabolism
NCAV_0525 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
NCAV_0525 (sdhB)
00720 Other carbon fixation pathways
NCAV_0525 (sdhB)
Enzymes [BR:
ncv01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NCAV_0525 (sdhB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_10
Fer4_17
Fer4_9
Fer4_16
Fer4_7
Fer4
Fer2
Fer4_18
Fer4_21
Fer4_2
Fer4_4
Fer4_6
Fer2_4
Motif
Other DBs
NCBI-ProteinID:
SPC33718
UniProt:
A0A2K5APY3
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All DBs
Position
NCAV:468673..469428
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AA seq
251 aa
AA seq
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MVKRVKIRVFRYNPAHDADARYDEFEVEAERWTTVLDALLYIKAHKDHSIALRYSCRMAS
CGSCGMLINGIPRLACYTKVYELGSDVVTCRPLPNFPIIRDLAADFAAFFAKHKSMKPYI
INEAAENIDGREFIQKPDEVEKYLQFSYCIKCGLCYAACPTVATDRRFPGPQALAQMYRY
LIDSRDKATDERLRIVDDRHGVWRCHFAGSCSMVCPKGVDPALGIQLLRAYLLGMNRDSK
VVAELYRREPK
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagagggttaagataagggtattcaggtacaatccagcacatgatgcagatgca
aggtacgatgagtttgaggttgaggctgagagatggactactgtgctcgatgctctactg
tacataaaggctcataaggatcatagcatagcgttgagatactcatgcaggatggcatca
tgcggctcttgtggcatgcttataaatggtataccaaggcttgcatgttacacaaaggta
tacgagttgggtagcgatgttgtaacctgtagaccattgccaaacttcccaataataagg
gatctagcagcagactttgcagcattctttgcaaagcataagagcatgaagccttacata
ataaatgaggcagcagagaacatagatggcagagagttcatccagaagcctgatgaggtt
gagaagtaccttcagttctcatactgtataaagtgtgggctatgctatgcagcatgccct
acagttgctacagatcgaaggttccctggccctcaagcattggcacaaatgtatagatac
cttatagatagcagggataaggctactgatgagaggttaaggattgttgatgataggcat
ggggtatggagatgccactttgctggttcatgcagcatggtatgcccaaagggtgttgac
cctgctctagggatacagttgctcagagcataccttcttggcatgaacagggatagcaag
gttgtagcagagctgtatagaagagaaccaaagtaa
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