Candidatus Nitrosocaldus cavascurensis: NCAV_0531
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Entry
NCAV_0531 CDS
T05329
Symbol
endA
Name
(GenBank) tRNA-splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
ncv
Candidatus Nitrosocaldus cavascurensis
Brite
KEGG Orthology (KO) [BR:
ncv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncv03016
]
NCAV_0531 (endA)
Enzymes [BR:
ncv01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
NCAV_0531 (endA)
Transfer RNA biogenesis [BR:
ncv03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
NCAV_0531 (endA)
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Ortholog
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
SPC33724
UniProt:
A0A2K5AQ12
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All DBs
Position
NCAV:complement(472325..472909)
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AA seq
194 aa
AA seq
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MVESIKGELIENRIVVWDLEHSRALFKEGFYGKPLGIPKPKDAEFDAPLILDLIEGYYLA
KKGRLEIYKRDGADSTDMRVKIEPLSMKEMASICRKEYARFDSKYMVFKELRDKGYVVTP
GIKFGCDFAVYEHGPGIDHAPYLVQVVGPGDLLTATMIVLSGRLATTVRKQFILAVVSVK
EKRVEFLAFDWWRA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggtagagagcataaaaggtgagttgatagagaataggatagttgtatgggacctagag
cactctagggctctctttaaggaagggttctatggcaagccccttggcataccaaaacca
aaggatgcggagttcgatgcaccactcatccttgacctcatagagggttactatctagca
aagaagggaaggttagagatctataagcgtgatggagcagactcaacagatatgagggtt
aagattgagcctctctcgatgaaggagatggcctctatatgcaggaaggagtacgctagg
ttcgatagcaagtatatggtattcaaggagttgagggataaaggctatgttgtaacacct
ggaataaagtttggctgtgactttgctgtatatgagcatggtccagggatagatcatgca
ccgtaccttgtgcaggttgttggtccaggggatctattaacagcaaccatgatagtgcta
tctggtaggctagcaactactgtaaggaagcagttcatacttgcagttgtaagtgtcaag
gagaagagggttgagttcctagcatttgactggtggagggcttaa
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