Candidatus Nitrosocaldus cavascurensis: NCAV_0557
Help
Entry
NCAV_0557 CDS
T05329
Symbol
infB
Name
(GenBank) putative translation initiation factor IF-2
KO
K03243
translation initiation factor 5B
Organism
ncv
Candidatus Nitrosocaldus cavascurensis
Brite
KEGG Orthology (KO) [BR:
ncv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ncv03012
]
NCAV_0557 (infB)
Translation factors [BR:
ncv03012
]
Eukaryotic type
Initiation factors
eIF-5
NCAV_0557 (infB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D4
IF-2
MMR_HSR1
GTP_EFTU_D2
ATP_bind_1
Dynamin_N
Roc
EF-G_D2
Ras
SRPRB
Motif
Other DBs
NCBI-ProteinID:
SPC33750
UniProt:
A0A2K5AQ32
LinkDB
All DBs
Position
NCAV:complement(493321..495099)
Genome browser
AA seq
592 aa
AA seq
DB search
MPIRQPVVVVLGHVDSGKTSLLDKIRGTAVQAREAGGITQHIGASFFPLETIREICGPLF
TRFGADVKVPGLLVIDTPGHEVFANLRMRGGSAADIAILVVDINKGLEAQTYESIEILKS
RKVPFVIALNKLDMLHGWRSGSSSMVLESLKKQNKSVVDELDAKIYSVVGALSRLGFRAE
AFYRVKDFTREIAIVPVSARTGEGIAELLAVLIGLTQQYMLKRLEVGEHGRGIVLEVKEE
TGLGMTANIILLDGILREGDEIMLAKRDSIVTARVKALLLPKPLDEMRDPRDRFIRTQEV
HAAAGVKVASPDLDGVLAGSPFYVIGKGVDIERLRQMLESEVRGLVISTDRIGVVLKCDT
LGSLEAITEMLKRSSIPIRIADIGHVTKRDVVEASTVREKDRYMGVVLAFNVKVLQDAQE
EADAHNVKIFTDKVIYNLVESYRQWVEQEREREESTIFASLTMPCKFMLLKGFVFRRSNP
AVFGVEIIEGRLRQKSLVINSEGSEVGAIHQIQDKGKSIDEARKGMQVAVSMNEPVVGRQ
IKEGEVLYTLPSTQHLKLLNERFKHKLTQEEQMLLDEIAKIRRKVDPLYGYI
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
ttgcctataagacagccagtagttgttgtgttaggacatgttgactctggcaagacatcc
ctactcgataagataagaggcactgcagtacaggctagagaggctggagggataacacag
catattggtgcaagtttctttccattggagactataagggagatctgtggcccactcttc
actagatttggtgcagatgtaaaggtcccaggcctactcgtcatagatacaccagggcat
gaggtctttgcaaacctaaggatgaggggaggctctgcagcagacatagcaatacttgta
gtagatataaacaagggtctagaagcgcaaacgtatgagagcatagagatactcaagagc
aggaaggtaccattcgttatagcattgaacaagctggatatgctccatggctggaggagt
ggttcaagcagcatggtactggagtcgctcaagaagcagaataaatcagttgtagatgag
ttggatgcaaagatatactcagtagtaggagcattatcaaggttagggttcagggcagag
gcattctacagggttaaggacttcacaagggagatagccatagtgccagtcagtgcaagg
actggggaagggattgcagaacttcttgcagtgcttataggtttgacacagcagtacatg
cttaagaggctagaggtaggtgagcatggaagaggtatagtgcttgaggtaaaggaggag
actggtctagggatgactgcaaatataatacttcttgatggcatactaagggaaggggat
gagatcatgcttgcaaagagggatagcatagttactgctagagtcaaggcactcttgcta
ccaaagcccctcgatgagatgagggaccctagggataggttcattaggacccaagaggtg
catgcagcagcaggagtaaaggtagcatcaccagacctagatggtgttcttgcaggttca
ccattctatgttataggcaaaggtgttgatatagagaggttgaggcagatgttggagagt
gaggttaggggccttgttataagtactgataggataggtgtagtgctaaagtgtgatacc
ctaggctcacttgaggctataactgagatgctcaagcgttcaagcataccaataaggatt
gcagatatagggcatgttacaaagagggatgtggtagaggcatcaactgtaagggagaag
gaccgctacatgggagttgttctagcattcaatgttaaggttctacaggatgctcaggaa
gaggcagatgcacataacgttaagatattcacagataaggtgatctacaaccttgtagag
tcttacaggcagtgggttgagcaggagagggagagggaagagagtactatatttgcctca
ctaaccatgccatgtaagttcatgctactcaagggttttgtattcaggaggagcaatcca
gcagtctttggagtagagataatagaggggaggttgaggcagaagagtcttgttatcaac
tctgaaggtagtgaggtaggagcaatacaccagatacaggataagggtaagagcatagat
gaggctaggaagggtatgcaggttgctgtatctatgaacgaacctgtagtagggagacag
ataaaggagggagaggtgctctacacactaccatccacacaacacctaaagttgcttaat
gagaggttcaagcataagcttacgcaagaggagcagatgcttctagatgagatagcaaag
ataaggaggaaagtagatccattgtatggctacatataa
DBGET
integrated database retrieval system
