Candidatus Nitrosocaldus cavascurensis: NCAV_0730
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Entry
NCAV_0730 CDS
T05329
Name
(GenBank) putative pre-mRNA processing ribonucleoprotein, snoRNA-binding domain protein
KO
K14564
nucleolar protein 56
Organism
ncv
Candidatus Nitrosocaldus cavascurensis
Pathway
ncv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ncv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NCAV_0730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncv03009
]
NCAV_0730
Ribosome biogenesis [BR:
ncv03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
NCAV_0730
Prokaryotic type
NCAV_0730
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Nop5_56-rel_N_Arc
SCO6045_C
DnaT_2
Motif
Other DBs
NCBI-ProteinID:
SPC33911
UniProt:
A0A2K5AQI2
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All DBs
Position
NCAV:635064..636395
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AA seq
443 aa
AA seq
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MIALYNATFLIGIVAEDDDGMSRCNLLLLENGIVAIDDADGSTKVVDVLKFNRESMAREY
SMIKSGLDDSRLSTILSSLKAKGYTSLACNDPILVDAAIRHGFSAVEMSAEDRLKVQHNK
VAIIVEAGLAEDEQDAFLALHEFSVSLSSIKVAEASAKPDQHIIQCINTIDELDKIVNIM
GARLREWYGLHFPELDGIVQSLPSYCDIVLRFGRRDAITVDALRSIGLQDEKKVDAIARA
ALTSKGGMISDENLILLQRIAEEIKHLSKQRDALARHMEDEMARVAPNLKDILGATIGAR
MIAKAGGLERLALLPASTIQVLGAEKALFRALRTGTRPPKHGIIFQHPSVHSAPRWQRGK
IARAIATKVAVAARIDAFTGTRDDTLLAKLNERLEEIREKYVEPRHEEKEEGEKKRKGRG
KGRGGGGGEERRERRRRRRGRKR
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgcactatataatgctacatttttaataggcattgtagcagaggatgatgatggt
atgagtaggtgtaatctactcttgcttgagaatggtatagttgctatagatgatgctgat
ggatcaaccaaggttgtagatgtattgaagttcaacagggagagtatggctagagagtat
agcatgatcaagagtgggttggatgatagtagactctcaacaatactctcatcactcaag
gcaaagggttacacatcacttgcatgcaatgatccaatacttgtggatgctgctataagg
catgggttctctgctgtagagatgagtgctgaggataggttgaaggtacaacataacaag
gttgctataatagttgaagcagggcttgctgaggatgagcaggatgcattccttgcactc
catgagttttcagtaagtctatcatcaatcaaggttgcagaggcatcagcaaaacctgat
cagcatataatccagtgcataaacacaatagatgagttggataagatcgtaaatataatg
ggggcaaggcttagggagtggtatggcttacacttccctgaacttgatggtatagtacaa
agccttccatcatactgtgatatagtgctaaggtttggtaggagagatgcaattacagta
gatgcattaaggagcataggcttgcaggatgagaagaaggtagatgctatagcaagggca
gcactaacaagcaagggaggtatgataagtgatgagaacctcatcctactccagaggatt
gctgaggagataaagcatctctcaaagcagagggatgctctagcaaggcatatggaggat
gagatggctagggttgcaccaaaccttaaggatatacttggagcaaccataggggcaagg
atgatagcaaaggctggaggacttgaaaggctagcattgctacctgctagcactatacaa
gttctaggtgcagagaaggcactatttagagccttgagaactggtactagaccaccaaag
catggcataatattccagcatccatctgtgcactcagcaccaagatggcagaggggcaag
attgctagagcaatagcaacaaaggttgctgttgcagcaaggatagatgcattcacaggg
acaagggatgatacactacttgcaaagttaaatgagaggcttgaggagataagagagaag
tatgtagagccaaggcatgaggagaaggaggagggagagaagaagaggaaggggagaggt
aaaggtagaggaggtggaggaggggaagaaaggagggagagaagaagaaggaggagggga
aggaagaggtag
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