Candidatus Nitrosocaldus cavascurensis: NCAV_0736
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Entry
NCAV_0736 CDS
T05329
Symbol
rlmE
Name
(GenBank) Ribosomal RNA large subunit methyltransferase E
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
ncv
Candidatus Nitrosocaldus cavascurensis
Brite
KEGG Orthology (KO) [BR:
ncv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncv03009
]
NCAV_0736 (rlmE)
Enzymes [BR:
ncv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
NCAV_0736 (rlmE)
Ribosome biogenesis [BR:
ncv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NCAV_0736 (rlmE)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
FtsJ
Methyltransf_31
Methyltransf_23
Tectonin
Methyltransf_25
Ubie_methyltran
PCMT
Methyltrans_Mon_2nd
Motif
Other DBs
NCBI-ProteinID:
SPC33917
UniProt:
A0A2K5AQM7
LinkDB
All DBs
Position
NCAV:complement(640864..641523)
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AA seq
219 aa
AA seq
DB search
MRLDEARRDYYRRLAKESGYKSRAAYKLLEINKSFHIFRKGDKVLDIGCYPGGWLQVASS
AVGSDGLVLGVDVREMDVGKGKGKGKGEREEDDGDGKGFGANVRFLCMSVEDDALAARVK
DILDEVDVVLSDVSPNLSGIWSLDHAKQIYMSRRVLDVAKVLLKDDGSAVLKVFDGDMLK
EFIDEVKMYFKKVYIHKPKASRKESSELYLVCKGFKSSK
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaggttagatgaggctagacgtgattactacaggaggcttgcaaaggagagcggttac
aagagtagggctgcatacaaactgcttgagatcaacaaatccttccatatatttagaaag
ggagataaggttcttgatataggatgttatcctggtggctggttacaggttgctagtagt
gctgttggttctgatgggcttgtgctgggtgttgatgtaagggagatggatgtgggtaag
ggtaagggtaaaggtaaaggagagagggaagaggatgatggagatgggaagggatttgga
gcaaatgttaggttcctctgcatgagcgtagaggatgatgctctagcagcaagagtaaag
gacatccttgatgaagttgatgttgtactctcagatgtatcaccaaacctctctgggata
tggagtttagatcatgcaaagcagatatacatgagcaggagagtgctggatgtagcaaag
gtactgctcaaggatgatgggagtgcagtgctaaaggtctttgatggtgatatgctcaag
gagttcatagatgaggttaagatgtacttcaagaaggtttacatacacaagccaaaggct
agcaggaaggagagtagcgaactctatctagtatgcaagggcttcaagtctagcaagtag
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