Candidatus Nitrosocaldus cavascurensis: NCAV_0852
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Entry
NCAV_0852 CDS
T05329
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit E'
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
ncv
Candidatus Nitrosocaldus cavascurensis
Pathway
ncv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ncv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCAV_0852 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncv03021
]
NCAV_0852 (rpoE)
Enzymes [BR:
ncv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCAV_0852 (rpoE)
Transcription machinery [BR:
ncv03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
NCAV_0852 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
S1_2
Motif
Other DBs
NCBI-ProteinID:
SPC34030
UniProt:
A0A2K5AQW9
LinkDB
All DBs
Position
NCAV:739512..740114
Genome browser
AA seq
200 aa
AA seq
DB search
MLEIVYGMFAIVEMVDVVRIPPHRFNTNLKDAALTILKEKYESMISTELGYVIMIIDADV
NPVGKVVHGDGSTYHKTRFSMLTFYPNIQEIVEGEVVEVTEFGAFVRIGPTDALLHLSQI
IDDFLNVDVKQGMIVASKSNRVLRIGSTVRARITAVSLKGGAMGKIGVTCRQPFLGAEEW
IREDVKKAEQQRAKVEEAKQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgctagagatagtatatggaatgtttgctattgtggagatggtagatgttgttaggata
ccacctcataggttcaacacaaacctaaaggatgctgccctaaccatactcaaggagaag
tatgagagtatgataagcactgaacttggctatgttataatgattattgatgctgatgtt
aaccctgtaggcaaggtagtacatggggatggttcaacctatcataagacaaggttcagc
atgctaaccttctatccaaacatacaggagatagtagaaggggaggttgtagaggttaca
gagtttggtgcctttgttaggataggacctacagatgcattgctccatctctcacagata
atagatgacttccttaacgttgatgttaagcaagggatgatagttgcaagcaagagcaat
agagttctaaggataggctcaactgtaagggcaaggataacagctgttagcctaaaagga
ggtgctatgggcaagataggtgtaacgtgtaggcaaccattccttggtgctgaggagtgg
ataagggaggatgttaagaaggctgagcagcagagggcaaaggttgaggaggcgaagcag
tga
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